FC920206

Overview
NameFC920206
Unique NameFC920206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:26..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  279 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAEF A
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLASSASAEFFA 171          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  279 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G+RG  +GW PTL+GYS QG C            S+I G E    ++T +YLA SASAEF A
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEENTYLWRTSLYLAASASAEFFA 170          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.151e-32
Identity = 69/130 (53.08%), Postives = 81/130 (62.31%), Query Frame = 3
Query:  291 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAEF A
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFA 175          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.378e-31
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3
Query:  297 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G R   +GW PTLLGYSAQG              +D+ G E A  Y+T +YLA SASAEF A
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQGLGKFGFYEIFKNVYADMLGEENAYLYRTSLYLAASASAEFFA 154          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.378e-31
Identity = 67/133 (50.38%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  282 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G RG  +GW PT +GYS QG C            S++ G E A  ++T +YLA SASAEF A
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLCKFGFYEVFKVLYSNMLGEENAYLWRTSLYLAASASAEFFA 176          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.298e-31
Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 3
Query:  282 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G+RG  +GW PT LGYS QG C            S++ G E    ++T +YLA SASAEF A
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFA 176          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 3
Query:  324 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G+RG  +GW PT +GYS QG C            +++   E A  Y+T +YLA SASAEF A
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLCKFGLYEVFKVQYNNMLDEETAYTYRTFVYLAASASAEFFA 160          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27
Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 3
Query:  303 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G+RG + G +PTL+GYS QG              S + G + A +Y+T IYLA SASAE +A
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASASAELLA 134          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20
Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  309 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G +  + G+  T +GYS QGA             S    P         +YL  SA+AEF+A
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGAGKYGGYEYFKHLYSSWLSP------GVTVYLMASATAEFLA 123          
BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = 3
Query:  333 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG              +D  G E A +++  I+LA SA+AE IA
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQGFLKFGFYEVFKKTYADAVG-EKADQFRIPIWLAASATAEVIA 120          
The following BLAST results are available for this feature:
BLAST of FC920206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_MOUSE5.660e-3352.24Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT7.393e-3352.24Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_PONAB2.151e-3253.08Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_CAEEL2.378e-3150.00Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_BOVIN2.378e-3150.38Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_HUMAN5.298e-3149.62Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CHOFU3.797e-2949.58Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO4.641e-2744.09Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST5.495e-2039.52Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI1.072e-1538.79Mitochondrial substrate carrier family protein N O... [more]

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Properties
Property NameValue
Genbank descriptionC32005D02EF RVDevelop1 Citrus clementina cDNA clone C32005D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920206 ID=FC920206; Name=FC920206; organism=Citrus clementina; type=EST; length=680bp
CGGGTTCTACAAATTGGAACCGAGAGACAGGAGGAGGAGAAGAGAAAGAG
AAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTATAATTCAATC
AAGCTTTTTACTCTCAAAATCAAATTTCAAAAATTCCGAAATGGCCCTCA
CAGAATCTTATAGGAAAAACTCTCTGATACCAAGCTACCTCTACTCCTCC
CAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGGCAGCAGCCGC
CACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTCGTTGTTGCGG
CACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGCATTCTACGCC
GCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTCACACGGCCGT
CACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGATCCTGTTAAGT
ATAAAAGCATATCATCTGGTTTTGGGGTTTTGCTCAAGGAACAGGGAATC
AGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTTACAGCGCCCA
AGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGAAGTACTACTCTG
ACATTGCTGGTCCAGAGTATGCTGCTAAGTACAAGACTTTAATCTACCTT
GCTGGCTCTGCTTCTGCTGAGTTCATTGCT
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