FC920239

Overview
NameFC920239
Unique NameFC920239
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10479 contig Ccv1_Contig10479:156..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_DROME (Apoptosis inhibitor 5 homolog OS=Drosophila melanogaster GN=Aac11 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 71/192 (36.98%), Postives = 118/192 (61.46%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            IE+LY+  E L+EA DK S++V +Y+ I++A K + K K+LA+Q I  FFK FPDL+  A+DA  DL E+++  +R QAI+ LP  C+   +   ++ D L QLL  ++  E   V+ +L+++++ D K+S+  LF+ I + DE +     RE+ L FI  K+  +   ++   +E+E +I +  KK  +DV
Sbjct:    4 IERLYKCYEILSEAGDKISEHVDEYKEILKAVKGTSKEKRLASQFIGNFFKHFPDLADTAIDAQFDLCEDDDTQIRRQAIKDLPKLCQGNADATIRVGDTLAQLLILDDPTELQQVNNSLLAIIKLDTKSSIAGLFQQISTGDETT-----RERCLKFIATKLLTMGPTVI--TKEIEDYIVEEIKKALQDV 188          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5A_XENLA (Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-A PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 75/192 (39.06%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +AKD   Q+   Y+ II+  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E L   +E++ +I   +KKV  DV
Sbjct:    4 VEELYRSYGILADAKDDVGQHKSAYQVIIDGVKGGAKEKRLAAQFIPKFFKHFPDLSDSALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLATKMKTLPEETL--TKEVDDYIFSESKKVLYDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_CHICK (Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 72/192 (37.50%), Postives = 115/192 (59.90%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +A + +   KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T + L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I   +KKV +DV
Sbjct:    4 VEELYRNYGILADATETAGQHKDAYQVILDGVKGGAKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGDNLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPEEVL--TKEVEEFILAESKKVLEDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_PONAB (Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I   +KKV +DV
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_MOUSE (Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I   +KKV +DV
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_HUMAN (Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDKSQNVKD-YEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +A ++    KD Y+ I++  K   K K+LAAQ IP+FFK FP+L+  A++A LDL E+E++ +R QAI+ LP F   T E L ++ DIL QLL  ++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  E+L   +E+E  I   +KKV +DV
Sbjct:    4 VEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA--TGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDIVRERAIKFLSTKLKTLPDEVL--TKEVEELILTESKKVLEDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5B_XENLA (Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-B PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 73/192 (38.02%), Postives = 114/192 (59.38%), Query Frame = 3
Query:  114 IEKLYEFGERLNEAKDK-SQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIEEEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPLKAELLKPQEEMERHITDLNKKVWKDV 686
            +E+LY     L +AKD   Q+   Y+ I++  K   K K+LAAQ IP+FFK FPDLS  A++A LDL E+E++ +R QAI+ L  F   T E L ++ DIL QLL +++  E + V+ AL+S+ + D K +L  LF  I        ++ +RE+ + F+  K+  L  ++L   +E++ +I   +KKV  DV
Sbjct:    4 VEELYRNYGILADAKDDVGQHKSAYQVILDGVKGGPKEKRLAAQFIPKFFKHFPDLSDAALNAQLDLCEDEDVSIRRQAIKELSQFA--TGENLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQI-----LQGEDVVRERAIKFLATKMKTLPEDIL--TKEVDDYIFSESKKVLYDV 186          
BLAST of FC920239 vs. ExPASy Swiss-Prot
Match: API5_DICDI (Apoptosis inhibitor 5 homolog OS=Dictyostelium discoideum GN=api5 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 53/189 (28.04%), Postives = 101/189 (53.44%), Query Frame = 3
Query:   48 STKTQKNQKISPMTDPSDEAKQIEKLYEFGERLNEAKDKSQNVKDYEGIIEAAKTSLKAKQLAAQLIPRFFKFFPDLSSRAVDAHLDLIE--EEELGVRVQAIRGLPLFCKDTPEYLSKIVDILVQLLAAEEIVERDAVHKALMSLLRQDVKASLTALFKHIGSVDEPSTDEFIREKVLSFIRDKVFPL 608
            +T T     + P    +DE   I   Y+   +L+       + K +  IIE +  + + K+L+ Q I ++FK FP L  +A+D  +DL +  +E++ +RV A++ +P  C+D P++++K+VDIL QLL  +  VE +    +L+ L + +   +L +    + S +    D+     +LSF+++ + PL
Sbjct:   26 TTATPTTATVVPQVVRNDE--YINTFYDIANKLDTNPSFPDDDKLFSKIIELSSKTKQTKKLSPQFISKYFKRFPTLQEKAIDCLIDLFDSSDEDVIMRVNALKAIPTICRDNPDHIAKLVDILSQLLNTDSKVEAEHTKNSLIELYKLNSVTTLNSFLTFLESEESSMEDQPASSTLLSFLKESIIPL 212          
The following BLAST results are available for this feature:
BLAST of FC920239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
API5_DROME1.356e-2736.98Apoptosis inhibitor 5 homolog OS=Drosophila melano... [more]
API5A_XENLA2.558e-2639.06Apoptosis inhibitor 5-A OS=Xenopus laevis GN=api5-... [more]
API5_CHICK4.363e-2637.50Apoptosis inhibitor 5 OS=Gallus gallus GN=API5 PE=... [more]
API5_PONAB5.698e-2638.02Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2... [more]
API5_MOUSE5.698e-2638.02Apoptosis inhibitor 5 OS=Mus musculus GN=Api5 PE=2... [more]
API5_HUMAN5.698e-2638.02Apoptosis inhibitor 5 OS=Homo sapiens GN=API5 PE=1... [more]
API5B_XENLA1.269e-2538.02Apoptosis inhibitor 5-B OS=Xenopus laevis GN=api5-... [more]
API5_DICDI1.041e-1928.04Apoptosis inhibitor 5 homolog OS=Dictyostelium dis... [more]
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Properties
Property NameValue
Genbank descriptionC32005G05EF RVDevelop1 Citrus clementina cDNA clone C32005G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920239 ID=FC920239; Name=FC920239; organism=Citrus clementina; type=EST; length=722bp
GAAACTCATTTCAGTTTTTGTTATCTGTTCGATTTCACACTCAGCTCTCT
ACCAAAACGCAAAAAAATCAAAAAATTTCCCCAATGACTGACCCCTCAGA
CGAGGCCAAGCAAATCGAGAAGCTCTACGAGTTCGGCGAACGACTCAACG
AGGCCAAGGACAAGTCTCAGAATGTGAAGGACTACGAGGGGATAATTGAA
GCTGCGAAAACGAGTCTTAAAGCTAAGCAATTGGCTGCTCAGTTGATTCC
TAGGTTTTTCAAGTTCTTTCCTGACCTATCCAGCCGCGCTGTTGATGCGC
ATCTCGATTTGATCGAGGAAGAAGAGCTTGGAGTTCGAGTGCAAGCAATT
AGGGGACTCCCTCTTTTCTGCAAGGATACGCCGGAGTATCTTTCTAAAAT
TGTTGACATTCTAGTACAACTCCTTGCAGCTGAGGAAATTGTGGAGCGTG
ATGCTGTGCACAAAGCACTTATGTCCCTTCTGAGGCAAGATGTGAAAGCT
TCTTTGACTGCCTTATTTAAGCACATTGGGAGTGTCGATGAACCAAGTAC
AGATGAGTTTATACGTGAGAAGGTTCTAAGCTTTATAAGAGATAAGGTTT
TCCCTCTTAAAGCTGAACTCTTGAAGCCTCAGGAGGAAATGGAAAGGCAT
ATAACTGATTTAAATAAAAAAGTTTGGAAAGATGTACGGGAGCAGAATTT
AGAATGTTTATGGATTTCCTGA
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