FC920244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920244 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.798e-50 Identity = 114/204 (55.88%), Postives = 136/204 (66.67%), Query Frame = 3 Query: 36 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIP 638 M A+ DSKP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DSF+FSIP Sbjct: 1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIP 195
BLAST of FC920244 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.596e-49 Identity = 112/204 (54.90%), Postives = 135/204 (66.18%), Query Frame = 3 Query: 36 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIP 638 M A+ D+KP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG S + L+P ILS DSF+FSIP Sbjct: 1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAG-TSKTTGLDPSILSFDSFDFSIP 195
BLAST of FC920244 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 84/157 (53.50%), Postives = 108/157 (68.79%), Query Frame = 3 Query: 174 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP 638 PPKP+ I P GTY V+LFFHG L N YS++L+H+ASHGYI+VAPQL LPP G EV+DA +V+NW S L++ LP +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +SFE IP Sbjct: 41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIP 196
BLAST of FC920244 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31 Identity = 79/188 (42.02%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 99 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP 638 + VF G + + + P+PL I+ P+E G Y V+LF HGT LSN YS +++ASHG+IVVAP+L+ PPK E++ AA+V NW+ LQ L VE +L +A+ GHSRGG AF LALG+ +N + + SAL+G+DPVAG SV P +L++ +SF SIP Sbjct: 34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGF-SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIP 219
BLAST of FC920244 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 67/150 (44.67%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 174 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH 614 PPK L + P E+G Y V++ HG L N+ YS L+ H++SHG+I++APQLY P E+ A +++WLS GL LP V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ Sbjct: 41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAY 185 The following BLAST results are available for this feature:
BLAST of FC920244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920244 ID=FC920244; Name=FC920244; organism=Citrus clementina; type=EST; length=691bpback to top |