FC920255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_DICDI (Clathrin heavy chain OS=Dictyostelium discoideum GN=chcA PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 9.940e-72 Identity = 127/210 (60.48%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALS 654 +L +LY++Y+ EKLMEH+KLF +RLN+PK+I+AC Q W +LTYLYI YDE DNA T++NHS EAWDH+ FK+ KVA ++LYY A+ FYL+E P LINDLL+VL+ R+DHTR V ++R GHL LVKPY+ EALNE+YVEEEDYE LR SID + NF I LAQK+EKHELLE RR+AAY+YKK RW QS+ LS Sbjct: 1320 ELAILYSKYKEEKLMEHLKLFYSRLNVPKVIKACQANQQWPQLTYLYIHYDEHDNAIQTMINHSIEAWDHVLFKETIPKVAKLDLYYSAISFYLEEQPLLINDLLSVLSPRIDHTRAVTLIRSLGHLPLVKPYLVSAQDQNVAALNEALNELYVEEEDYESLRSSIDANSNFGTIALAQKLEKHELLEFRRIAAYLYKKNNRWAQSVELS 1529
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_MOUSE (Clathrin heavy chain 1 OS=Mus musculus GN=Cltc PE=1 SV=3) HSP 1 Score: 234.958 bits (598), Expect = 2.713e-61 Identity = 108/209 (51.67%), Postives = 151/209 (72.25%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ +K+ EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNA T+MNH +AW QFKD+ KVANVELYYKA+ FYL+ P L+NDLL VL+ R+DHTR V+ K L LVKPY+ E+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L Sbjct: 1319 ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVEL 1527
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH1_HUMAN (Clathrin heavy chain 1 OS=Homo sapiens GN=CLTC PE=1 SV=5) HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61 Identity = 107/209 (51.20%), Postives = 151/209 (72.25%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ +K+ EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNA T+MNH +AW QFKD+ KVANVELYY+A+ FYL+ P L+NDLL VL+ R+DHTR V+ K L LVKPY+ E+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L Sbjct: 1319 ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVEL 1527
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH1_BOVIN (Clathrin heavy chain 1 OS=Bos taurus GN=CLTC PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61 Identity = 107/209 (51.20%), Postives = 151/209 (72.25%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ +K+ EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNA T+MNH +AW QFKD+ KVANVELYY+A+ FYL+ P L+NDLL VL+ R+DHTR V+ K L LVKPY+ E+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L Sbjct: 1319 ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVEL 1527
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_RAT (Clathrin heavy chain 1 OS=Rattus norvegicus GN=Cltc PE=1 SV=3) HSP 1 Score: 231.876 bits (590), Expect = 2.297e-60 Identity = 107/209 (51.20%), Postives = 150/209 (71.77%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ +K+ EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNA T+MNH +AW QFKD+ KVANVELYYKA+ FYL+ P L+NDLL VL+ R+ HTR V+ K L LVKPY+ E+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L Sbjct: 1319 ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLAHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVEL 1527
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_DROME (Clathrin heavy chain OS=Drosophila melanogaster GN=Chc PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 8.728e-60 Identity = 109/209 (52.15%), Postives = 144/209 (68.90%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ K+ EH++LF +R+NIPK++RA + W EL +LY +Y+E+DNA +M H EAW FKD+ KVAN+ELYYKA+ FYL P L+ND+L VLA R+DHTR V K G+L LVKPY+ EALN + ++EEDY+ LR SID DNFD I LAQK+EKHEL E RR+AAY+YK RWKQS+ L Sbjct: 1320 ELAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLWSELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYKAIEFYLDFKPLLLNDMLLVLAPRMDHTRAVSYFSKTGYLPLVKPYLRSVQSLNNKAINEALNGLLIDEEDYQGLRNSIDGFDNFDNIALAQKLEKHELTEFRRIAAYLYKGNNRWKQSVEL 1528
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH2_HUMAN (Clathrin heavy chain 2 OS=Homo sapiens GN=CLTCL1 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 6.255e-58 Identity = 107/209 (51.20%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++++ +K++EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNA T+M+H EAW QFKD+ KVANVEL Y+A+ FYL P LINDLL VL+ R+DHT V KAG L LVKPY+ EALN + EEEDY+ LR SID +DNFD I LAQ++EKH+L+E R +AAY+YK W QS+ L Sbjct: 1319 ELAILYSKFKPQKMLEHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMMSHPTEAWKEGQFKDIITKVANVELCYRALQFYLDYKPLLINDLLLVLSPRLDHTWTVSFFSKAGQLPLVKPYLRSVQSHNNKSVNEALNHLLTEEEDYQGLRASIDAYDNFDNISLAQQLEKHQLMEFRCIAAYLYKGNNWWAQSVEL 1527
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_CAEEL (Probable clathrin heavy chain 1 OS=Caenorhabditis elegans GN=chc-1 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.393e-57 Identity = 105/209 (50.24%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++Y+ EK+ EH++LF +R+NIPK++RA ++ W EL +LY +Y+E+DNAA T+M H E+W FK+V KVANVELYYKA+ FYL P L+NDLL VL+ R+DH+R V K + LVKPY+ EALN++ ++EED+ LR SI+ DNFD I LAQ++EKH L+E RR++AY++K RWKQSI L Sbjct: 1321 ELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAALTMMQHPTESWREQHFKEVIAKVANVELYYKAMQFYLDYKPLLLNDLLTVLSPRLDHSRTVLFFNKLKQIPLVKPYLRQVQNLNNKAINEALNQLLIDEEDHAGLRSSIEAQDNFDNITLAQQLEKHPLVEFRRISAYLFKGNNRWKQSIEL 1529
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_SCHPO (Probable clathrin heavy chain OS=Schizosaccharomyces pombe GN=chc1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 7.646e-56 Identity = 103/213 (48.36%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 16 FSPQLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALS 654 F +L +LYA+Y+ E++MEH+KLF RLN+ K+IRACD+ W E +LY+ +DNAA +M PEA+DH FKD+ V VAN+ELYY+A++FYL++HP L+ DLL L R+DH RV+ I K+ + L+ +M A N++ +E EDY+ L++SI+ +D+FD I LA+++EKH LLE RR+AAYIY+K RW QSI LS Sbjct: 1312 FYTELAILYAKYKPERMMEHLKLFWGRLNMAKVIRACDQMHLWNEAVFLYVHDQSYDNAAAVMMEQ-PEAFDHQSFKDIIVHVANLELYYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQHLNIQAVNHAYNDLLIEMEDYQSLQDSIENYDHFDAIALARRLEKHSLLEFRRIAAYIYRKNKRWTQSIELS 1523
BLAST of FC920255 vs. ExPASy Swiss-Prot
Match: CLH_YEAST (Clathrin heavy chain OS=Saccharomyces cerevisiae GN=CHC1 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.650e-50 Identity = 87/209 (41.63%), Postives = 145/209 (69.38%), Query Frame = 1 Query: 25 QLGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMXXXXXXXXXXXXEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIAL 651 +L +LY++Y +K EH+KLF +R+NIPK+IRA ++ W EL +LY YDE+DNAA T++ S + DH FK+V VKV+N+E+YYKA++FY++ HP L+ DLL L R+D R V I K+ +L L+KP++ +A +++ +EEEDY+ L++++D +D FDQ+GLA ++E H+L+ +++ A +Y++ +W +S+++ Sbjct: 1325 ELAILYSKYEPDKTFEHLKLFWSRINIPKVIRAVEQAHLWSELVFLYAHYDEWDNAALTLIEKSTKDLDHAYFKEVVVKVSNLEIYYKAINFYVKFHPSLLVDLLTSLTPRLDIPRTVKIFSKSDNLPLIKPFLINVLPKNNSVVNQAYHDLMIEEEDYKALQDAVDSYDKFDQLGLASRLESHKLIFFKKIGALLYRRNKKWAKSLSI 1533 The following BLAST results are available for this feature:
BLAST of FC920255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920255 ID=FC920255; Name=FC920255; organism=Citrus clementina; type=EST; length=654bpback to top |