FC920281

Overview
NameFC920281
Unique NameFC920281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14111 contig Ccv1_Contig14111:1..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAB_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Arabidopsis thaliana GN=PP2AA2 PE=1 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 5.704e-97
Identity = 175/190 (92.11%), Postives = 186/190 (97.89%), Query Frame = 3
Query:  120 MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            M+M+DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVE+AHVLLPPLETL TVEETCVR+KAVESLCR+GSQMRESDLVD +I LVKRLAAGEWFTARVSACG+FHIAYPSAPD+LKTELRS+YTQLCQDDMPM RR+AA+NLGKF
Sbjct:    1 MSMIDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMRESDLVDHFISLVKRLAAGEWFTARVSACGVFHIAYPSAPDMLKTELRSLYTQLCQDDMPMVRRAAATNLGKF 190          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAA_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Arabidopsis thaliana GN=PP2AA1 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.677e-91
Identity = 162/190 (85.26%), Postives = 180/190 (94.74%), Query Frame = 3
Query:  120 MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSEN+DDDDEVLLAMAEELGVFIP+VGG+E AHVLLPPLE+LCTVEETCVR+KAVESLC+IGSQM+E+DLV+ ++PLVKRLA GEWF ARVSACG+FH+AY    D+LKTELR+ Y+QLC+DDMPM RR+AASNLGKF
Sbjct:    1 MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDDDEVLLAMAEELGVFIPFVGGIEFAHVLLPPLESLCTVEETCVREKAVESLCKIGSQMKENDLVESFVPLVKRLAGGEWFAARVSACGIFHVAYQGCTDVLKTELRATYSQLCKDDMPMVRRAAASNLGKF 190          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAG_ARATH (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform OS=Arabidopsis thaliana GN=PP2AA3 PE=1 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 6.108e-91
Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 3
Query:  120 MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            M+MVDEPLYPIAVLIDELKNDDIQ RLNSI+RLS IARALGEERTRKELIPFLSENNDDDDEVLLAMAEELG FI YVGGVE+A+VLLPPLETL TVEETCVR+KAV+SLCRIG+QMRESDLV+ + PL KRL+AGEWFTARVSACG+FHIAYPSAPD+LKTELRSIY QLCQDDMPM RR+AA+NLGKF
Sbjct:    1 MSMVDEPLYPIAVLIDELKNDDIQRRLNSIKRLSIIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGGFILYVGGVEYAYVLLPPLETLSTVEETCVREKAVDSLCRIGAQMRESDLVEHFTPLAKRLSAGEWFTARVSACGIFHIAYPSAPDVLKTELRSIYGQLCQDDMPMVRRAAATNLGKF 190          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAA_PIG (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.016e-61
Identity = 118/186 (63.44%), Postives = 142/186 (76.34%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG E+ H LLPPLE+L TVEET VRDKAVESL  I  +   SDL   ++PLVKRLA G+WFT+R SACGLF + YP     +K ELR  +  LC DD PM RR+AAS LG+F
Sbjct:    7 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEF 192          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAA_MOUSE (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3)

HSP 1 Score: 236.498 bits (602), Expect = 1.016e-61
Identity = 118/186 (63.44%), Postives = 142/186 (76.34%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG E+ H LLPPLE+L TVEET VRDKAVESL  I  +   SDL   ++PLVKRLA G+WFT+R SACGLF + YP     +K ELR  +  LC DD PM RR+AAS LG+F
Sbjct:    7 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEF 192          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAA_HUMAN (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4)

HSP 1 Score: 236.498 bits (602), Expect = 1.016e-61
Identity = 118/186 (63.44%), Postives = 142/186 (76.34%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG E+ H LLPPLE+L TVEET VRDKAVESL  I  +   SDL   ++PLVKRLA G+WFT+R SACGLF + YP     +K ELR  +  LC DD PM RR+AAS LG+F
Sbjct:    7 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEF 192          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAB_HUMAN (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Homo sapiens GN=PPP2R1B PE=1 SV=3)

HSP 1 Score: 231.876 bits (590), Expect = 2.503e-60
Identity = 116/186 (62.37%), Postives = 144/186 (77.42%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG + AH LLPPLE L TVEET VRDKAVESL +I  +     L  +++PLVKRLA+G+WFT+R SACGLF + YP A + +K E+R  +  LC DD PM RR+AAS LG+F
Sbjct:   19 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKAVESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQQFRSLCSDDTPMVRRAAASKLGEF 204          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAB_RAT (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus GN=Ppp2r1b PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.283e-60
Identity = 116/186 (62.37%), Postives = 144/186 (77.42%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG + AH LLPPLE+L TVEET VRDKAVESL +I  +     L   ++PLVKRLA+G+WFT+R SACGLF + YP A + +K E+R  +  LC DD PM RR+AAS LG+F
Sbjct:   19 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQHFRSLCSDDTPMVRRAAASKLGEF 204          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAB_PIG (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.283e-60
Identity = 116/186 (62.37%), Postives = 144/186 (77.42%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG + AH LLPPLE+L TVEET VRDKAVESL +I  +     L   ++PLVKRLA+G+WFT+R SACGLF + YP A + +K E+R  +  LC DD PM RR+AAS LG+F
Sbjct:   20 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQHFRSLCSDDTPMVRRAAASKLGEF 205          
BLAST of FC920281 vs. ExPASy Swiss-Prot
Match: 2AAB_MOUSE (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.614e-59
Identity = 115/186 (61.83%), Postives = 143/186 (76.88%), Query Frame = 3
Query:  132 DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMXRRSAASNLGKF 689
            D+ LYPIAVLIDEL+N+D+QLRLNSI++LSTIA ALG ERTR EL+PFL++   D+DEVLLA+AE+LG F   VGG + AH LLPPLE+L TVEET VRDKAVESL +I  +     L   ++PLVKRLA+G+WF +R SACGLF + YP A + +K E+R  +  LC DD PM RR+AAS LG+F
Sbjct:   19 DDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLESLATVEETVVRDKAVESLRQISQEHTPVALEAHFVPLVKRLASGDWFMSRTSACGLFSVCYPRASNAVKAEIRQHFRSLCSDDTPMERRAAASKLGEF 204          
The following BLAST results are available for this feature:
BLAST of FC920281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
2AAB_ARATH5.704e-9792.11Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_ARATH4.677e-9185.26Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAG_ARATH6.108e-9187.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_PIG1.016e-6163.44Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_MOUSE1.016e-6163.44Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAA_HUMAN1.016e-6163.44Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAB_HUMAN2.503e-6062.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAB_RAT7.283e-6062.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAB_PIG7.283e-6062.37Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
2AAB_MOUSE3.614e-5961.83Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionC32006C06EF RVDevelop1 Citrus clementina cDNA clone C32006C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920281 ID=FC920281; Name=FC920281; organism=Citrus clementina; type=EST; length=690bp
GGAACAGATTCGTAAATCTCTCTCTTCTCTCTGAGCAGAGGTCGCTGCGG
GAGGATATTGAGATCGTGCTTCTGGGTAGATAGTTGATCATAAGGGTTTT
CCAAGCGTTTTGAAACACAATGGCAATGGTTGATGAACCATTATACCCAA
TAGCCGTTCTCATAGACGAGCTGAAAAATGATGACATACAGCTTAGGTTG
AACTCAATACGTAGGCTGTCAACAATTGCACGCGCTCTTGGGGAGGAGCG
GACTCGGAAGGAATTAATTCCATTTCTGAGCGAAAACAATGACGATGATG
ATGAGGTACTTCTTGCAATGGCAGAAGAGCTTGGTGTTTTCATTCCATAT
GTGGGAGGAGTTGAGCATGCCCATGTTTTGCTTCCGCCTCTGGAGACCCT
TTGTACTGTTGAGGAGACCTGCGTGAGGGACAAAGCCGTTGAGTCTTTGT
GTAGAATTGGGTCTCAGATGAGGGAGAGTGATTTGGTTGATTGGTATATT
CCTCTGGTCAAGAGACTAGCGGCTGGTGAATGGTTTACGGCTCGGGTTTC
TGCATGTGGGCTGTTTCACATTGCTTATCCAAGTGCCCCAGATATTTTAA
AGACAGAATTGCGGTCAATATACACCCAATTGTGTCAAGATGACATGCCC
ATGGNTAGGAGGTCTGCTGCATCCAATCTGGGCAAATTTG
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