FC920295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_CAEEL (Dihydropyrimidine dehydrogenase [NADP+] OS=Caenorhabditis elegans GN=dpyd-1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.285e-30 Identity = 73/162 (45.06%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 238 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR R GS G + G + NIELIS++ E L+ ++LK +P KI+IASIM YNKA W EL + EE G D +E+N SCPHGM E MG A G Sbjct: 544 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPRIVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVIASIMCVYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACG 699
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_DANRE (Dihydropyrimidine dehydrogenase [NADP+] OS=Danio rerio GN=dpyd PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 69/160 (43.12%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + G++ PNPF + S PP T+ +++RAF++GWG + KT LD V NV+PR R G+ G I G + NIELIS++ K +LKA +P I+IASIM YN+A W EL +E+ D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVTNVSPRIVR------GTTSGHIFGPGQGSFLNIELISEKTAAYWCKSVAELKADFPKNIIIASIMCSYNQADWTELAKMAQESQADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_MOUSE (Dihydropyrimidine dehydrogenase [NADP+] OS=Mus musculus GN=Dpyd PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 71/160 (44.38%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ +LKA +PD ILIASIM YNK+ W EL E +G D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSYNKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_CAEBR (Probable dihydropyrimidine dehydrogenase [NADP+] OS=Caenorhabditis briggsae GN=dpyd-1 PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 70/162 (43.21%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 238 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR R GS G + G + NIELIS++ E L+ ++LK +P KI++ASIM YNK W EL + E G D +E+N SCPHGM E MG A G Sbjct: 554 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPRIVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVVASIMCVYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACG 709
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_RAT (Dihydropyrimidine dehydrogenase [NADP+] OS=Rattus norvegicus GN=Dpyd PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 71/160 (44.38%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ +LKA +PD ILIASIM YNK W EL E +G D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSYNKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_DICDI (Dihydropyrimidine dehydrogenase [NADP+] OS=Dictyostelium discoideum GN=pyd1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + G++ PNPF + S P T+ +++R+F++GWG V KT SLD V NV+PR R + GQ + NIELIS++ K +LK +PD+I+IASIM +NK W +L E +G D IE+N SCPHGM E MG A G Sbjct: 530 DISVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIVRGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKAIGELKRDFPDRIVIASIMCGFNKEDWTQLAKMAEASGADGIELNLSCPHGMGEKGMGLACG 683
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_PONAB (Dihydropyrimidine dehydrogenase [NADP+] OS=Pongo abelii GN=DPYD PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E++G D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_HUMAN (Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 69/160 (43.12%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E++G D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIIR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: DPYD_PIG (Dihydropyrimidine dehydrogenase [NADP+] OS=Sus scrofa GN=DPYD PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 69/160 (43.12%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR R G+ G + G + NIELIS++ + +LKA +PD I+IASIM YNK W EL + E +G D +E+N SCPHGM E MG A G Sbjct: 532 DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACG 685
BLAST of FC920295 vs. ExPASy Swiss-Prot
Match: YEIA_ECOLI (Uncharacterized protein yeiA OS=Escherichia coli (strain K12) GN=yeiA PE=3 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 72/155 (46.45%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 244 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDXIEVNFSCPHGMPET*MGAAVG 708 DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+ L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ WEEL V+E G D IE NFSCP M MG+ VG Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVG 150 The following BLAST results are available for this feature:
BLAST of FC920295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920295 ID=FC920295; Name=FC920295; organism=Citrus clementina; type=EST; length=710bpback to top |