FC920301

Overview
NameFC920301
Unique NameFC920301
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC920301 vs. ExPASy Swiss-Prot
Match: Y5843_ARATH (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 2 
Query:  287 KRRGRSKKVKFDGWGSIPLIEFLQSLGKDTAQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 565
            KR+ R K+ +F GWGS  LIEFL SLGKDT++ ISRYDV+D I KY+++  L+    KK+VV D+RL+ LFG ++  R+K+YDLLE HY ENQ
Sbjct:   19 KRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQ 111
The following BLAST results are available for this feature:
BLAST of FC920301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5843_ARATH2.375e-2456.99Uncharacterized protein At5g08430 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC32006E06EF RVDevelop1 Citrus clementina cDNA clone C32006E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920301 ID=FC920301; Name=FC920301; organism=Citrus clementina; type=EST; length=718bp
GGCGGTTTTTCAGAGTCTTACACTGATACCGTTGATGATCAAGCCAAATA
GAAAGTAAGACTTGAGTTGGAATGCTGCTTGGTGGTTGCTAGTGGCCCTA
TGACTCGTTGTCTCTTTTCAGGAAATTTTTCGTTTCCTATGCTCAATTGA
AAATATGAACATTGTGGGTGTGCTGCCATTAGTAAAATTTTGATGCTTTA
ATAATATGGGTAGTAAAGCAGATCAAGAGTCATTTCTTTGGGTGCCAGAG
TATGATGAACCACTAAGTCCTCAGCTAACTAATTTGAAACGAAGGGGCAG
ATCAAAGAAAGTCAAGTTTGATGGTTGGGGATCAATACCACTTATTGAAT
TTCTTCAATCACTTGGTAAAGATACCGCCCAACAGATTTCTCGATATGAT
GTCACTGACATTATTAATAAATATGTTAATGAGAATAAACTGGTTCACTC
AGTGAAGAAGAAGAGGGTTGTTTCTGATGAGAGGCTTCTTTCTCTTTTTG
GAAAGAAATCGTTTCTCCGAATTAAAATCTATGATCTGCTGGAAGCGCAC
TATGCTGAGAACCAGTTTGAATCAGATGATGATTTTTTATTTAGTTCAGA
TGAGGAGAATAATTTATTCAGCTCTGAAAAAACAAAAAGTAGAAAAGTCC
CTTTGAAGAAATTATGTTTGGAAACTCCCAAAGCTGTTGGGCTGCCATAG
TTCCTGATACATAAAGCT
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