FC920307

Overview
NameFC920307
Unique NameFC920307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11134 contig Ccv1_Contig11134:67..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.390e-58
Identity = 91/133 (68.42%), Postives = 105/133 (78.95%), Query Frame = 2
Query:  212 KGASFLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            +G+  LV  L I I F   +      ++Q++ D+V KLPGQNFNV+FAHYSG+V  NE+ GRALFYW  EAVED  SKPLVLWLNGGPGCSS+AYGEAEEIGPFHIK DGKTLYLN YSWNQ ANILFLD+P+
Sbjct:    5 RGSCCLVNAL-IAIAFLATAHLCEAGLSQKEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPV 136          

HSP 2 Score: 58.5362 bits (140), Expect = 1.390e-58
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            PVGVG+SYSNTSSD+ +NGDKRTAEDSLKF   ++ V  F E
Sbjct:  135 PVGVGYSYSNTSSDLKSNGDKRTAEDSLKFL--LKWVERFPE 174          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.110e-48
Identity = 70/99 (70.71%), Postives = 85/99 (85.86%), Query Frame = 2
Query:  314 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPL 610
            V ++PGQ F+ +FAHY+GYVTV+E+ G ALFYWF EA  DP SKPL+LWLNGGPGCSSIA+G  EE+GPFH+  DGK +++NPYSWNQVANILFLDSP+
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNPYSWNQVANILFLDSPV 99          

HSP 2 Score: 51.9878 bits (123), Expect = 1.110e-48
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVG+SYSNTS+DI +NGD+RTA+DSL F
Sbjct:   98 PVGVGYSYSNTSADILSNGDERTAKDSLVF 127          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.174e-48
Identity = 75/129 (58.14%), Postives = 101/129 (78.29%), Query Frame = 2
Query:  227 LVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            + ++L +   F +   +++    +Q+ DR+  LPG+  +V+F+H+SGY+TVNE +GRALFYW  E+   E+P+SKPLVLWLNGGPGCSS+AYG AEEIGPF I PDGKTLY NPYSWN++AN+LFL+SP
Sbjct:    1 MARLLLLFFFFLILLHYASCSRHEQEKDRIFHLPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGGPGCSSVAYGAAEEIGPFRINPDGKTLYHNPYSWNKLANLLFLESP 129          

HSP 2 Score: 47.3654 bits (111), Expect = 4.174e-48
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSYSNT+SD+ T GD+RTAED+  F
Sbjct:  129 PAGVGFSYSNTTSDLYTAGDQRTAEDAYVF 158          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.306e-46
Identity = 73/122 (59.84%), Postives = 93/122 (76.23%), Query Frame = 2
Query:  245 ICIIFYLGSAFSTDPVAQQKL-DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            +C++  L    S+D   +QK+ D++  LPGQ  N+NF+ +SGYVTV+  +GRALFYW  EA     +KPLVLWLNGGPGCSSIAYG +EE+GPF + PDGKTL LN Y+WN+VAN+LFLDSP
Sbjct:   14 LCMVIALLDVVSSDDAKEQKMKDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSP 135          

HSP 2 Score: 48.521 bits (114), Expect = 1.306e-46
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            P GVGFSY+NTSSD  T GDKRT ED+ +F   VR +  F E
Sbjct:  135 PAGVGFSYTNTSSDELTVGDKRTGEDAYRFL--VRWLERFPE 174          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.417e-45
Identity = 79/131 (60.31%), Postives = 97/131 (74.05%), Query Frame = 2
Query:  221 SFLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEA--VEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            SFL+ IL + I     +A S+  V +Q  DR+  LPGQ  NV+F  YSGYVTV+EE GRALFYW VE+    DP S+PLVLWLNGGPGCSS+AYG AEEIGPF +  DGKTL+   Y+WN++AN+LFL+SP
Sbjct:    4 SFLLIILLLTISTSCCAAPSSY-VEEQLRDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESP 133          

HSP 2 Score: 48.9062 bits (115), Expect = 1.417e-45
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSYSNT+SD+ T GD+RTAEDS  F
Sbjct:  133 PAGVGFSYSNTTSDLYTTGDQRTAEDSYIF 162          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.674e-40
Identity = 71/130 (54.62%), Postives = 90/130 (69.23%), Query Frame = 2
Query:  236 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPLVLVF 622
            +LF+  +  L  A S+    +Q+ DR+  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E+    P +KPL+LWLNGGPGCSSIAYG +EEIGPF I   G  LYLN +SWN  AN+LFL+SP+ + F
Sbjct:    6 LLFLLFVL-LSLATSSTSTKEQEEDRIKALPGQP-KVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGF 133          

HSP 2 Score: 46.2098 bits (108), Expect = 4.674e-40
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSY+NTSSD   +GD+RTA+++L F
Sbjct:  128 PVGVGFSYTNTSSDFEESGDERTAQENLIF 157          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.090e-40
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 2
Query:  239 LFICIIFYLGSAF-STDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVE-DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            +F+ ++  L + F S+    +Q+ DR+  LPGQ   V F+ YSGYV VN+  GRALFYW  E+    P +KPL+LWLNGGPGCSSIAYG +EEIGPF I   G  LYLN ++WN+ AN+LFL+SP
Sbjct:    7 IFLLLVALLSTTFPSSSSSREQEKDRIKALPGQP-KVAFSQYSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESP 130          

HSP 2 Score: 46.2098 bits (108), Expect = 6.090e-40
Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            P GVG+SY+NTSSD+  +GD+RTA+D+L F   ++ +S F +
Sbjct:  130 PAGVGYSYTNTSSDLKDSGDERTAQDNLIFL--IKWLSRFPQ 169          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.347e-39
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 2
Query:  296 QQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            + + DR+  LPGQ  NV F  +SGYVTV++ SGR+LFYW  EA + P SKPLV+WLNGGPGCSS+AYG +EEIGPF I   G  LYLN ++WN ++N+LFL++P
Sbjct:   32 EAEADRITSLPGQP-NVTFEQFSGYVTVDKLSGRSLFYWLTEASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAP 134          

HSP 2 Score: 46.9802 bits (110), Expect = 1.347e-39
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            P GVGFSY+N SSD+   GD+RTA+DSL+F
Sbjct:  134 PAGVGFSYTNRSSDLFNTGDRRTAKDSLQF 163          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.755e-39
Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  239 LFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 607
            L I ++    ++ S+  + +Q+ D +  LPGQ   V F+ +SGYVTVNE  GR+LFYW  E+     +KPL+LWLNGGPGCSSI YG +EEIGPF I   G  LYLN ++WN  ANILFL+SP
Sbjct:    6 LIIILLVISSTSSSSSSLREQEEDMIKALPGQP-QVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESP 127          

HSP 2 Score: 45.8246 bits (107), Expect = 1.755e-39
Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKFY*SVRTVSHFKE 729
            P GVGFSY+NTSSD+  +GD+RTA+++L F   ++ +S F +
Sbjct:  127 PAGVGFSYTNTSSDLKDSGDERTAQENLIFL--IKWMSRFPQ 166          
BLAST of FC920307 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.052e-39
Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  224 FLVQILFICIIFYLGSA---------------FSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGK-TLYLNPYSWNQVANILFLDSPLVLVF 622
            F V +LF+ + F LGS                F +  +A Q+ DRV +LPGQ   V F  Y+GYVTVNE  GRALFYWF EA ++P  KP++LWLNGGPGCSSI +G AEE+GPF  +   +  L LNPYSWN+ AN+LFL+SP+ + F
Sbjct:    8 FSVLVLFL-VSFLLGSTSAEKLCSDNDGDNGCFRSRVLAAQRADRVKELPGQP-PVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGF 154          

HSP 2 Score: 41.5874 bits (96), Expect = 5.052e-39
Identity = 20/30 (66.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  604 PVGVGFSYSNTSSDITTNGDKRTAEDSLKF 693
            PVGVGFSY+NTS DI   GD  TA DS  F
Sbjct:  149 PVGVGFSYTNTSRDIKQLGDTVTARDSYNF 178          
The following BLAST results are available for this feature:
BLAST of FC920307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP29_ARATH1.390e-5868.42Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU1.110e-4870.71Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP26_ARATH4.174e-4858.14Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP28_ARATH1.306e-4659.84Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP27_ARATH1.417e-4560.31Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP22_ARATH4.674e-4054.62Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP24_ARATH6.090e-4054.40Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP25_ARATH1.347e-3959.62Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP23_ARATH1.755e-3952.85Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP34_ARATH5.052e-3951.01Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32006F07EF RVDevelop1 Citrus clementina cDNA clone C32006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920307 ID=FC920307; Name=FC920307; organism=Citrus clementina; type=EST; length=734bp
GGACATCATTCAAATCATTCATCGAACCCACTATTCTGGACAGAGAAATC
AAAAGGGCTTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAA
AAATTCCTCAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGT
CTTCTTTATAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGG
CTTATAATCCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGC
ATAATTTTTTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCA
AAAACTTGACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACT
TTGCCCATTACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCT
CTCTTTTATTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCT
TGTGCTTTGGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAG
AGGCAGAGGAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTA
TACTTGAATCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGA
TTCCCCGTTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTAC
GACCAATGGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTACTAAA
GTGTTAGAACGGTTTCACATTTTAAGGAGGGATT
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