FC920308

Overview
NameFC920308
Unique NameFC920308
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length427
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7687 contig Ccv1_Contig7687:1..427. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 8.816e-63
Identity = 113/140 (80.71%), Postives = 127/140 (90.71%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            S+EYHQETL+NLR AM+NTG+LCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDY +KGDE  ICMSYKKLA DV PG VILC+DGTIS  VL C+ + G V+CRCEN++MLGERKNVNLPGV+VDLPTLTEKD++
Sbjct:   44 SYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCADGTISLKVLSCDKEKGTVRCRCENTSMLGERKNVNLPGVVVDLPTLTEKDKQ 183          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.375e-62
Identity = 112/139 (80.58%), Postives = 129/139 (92.81%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            SH+YHQET++NLR AM +TGILCAVMLDTKGPEIRTGFLKD KP+QLKQGQEITISTDY+IKGDE+MICMSYKKLA DV+P SVILC+DG I+FTVL C+ + GL +CRCEN+A+LGERKNVNLPGVIVDLPTLT+KD+
Sbjct:   55 SHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFTVLSCDKENGLDRCRCENTAVLGERKNVNLPGVIVDLPTLTDKDK 193          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.171e-61
Identity = 110/140 (78.57%), Postives = 126/140 (90.00%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            +H+YHQETLNNL+TAM NTGILCAVMLDTKGPEIRTGFLKDGKPIQLK+GQE+TI+TDY IKGD  MI MSYKKL V ++PG+ ILCSDGTI+ TVL C+  AG V+CRCEN+A LGERKNVNLPGV+VDLPTLTEKD++
Sbjct:   58 THDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLGERKNVNLPGVVVDLPTLTEKDKE 197          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 5.348e-60
Identity = 107/140 (76.43%), Postives = 126/140 (90.00%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            +HEYHQETL+NL+ AM NT ILCAVMLDTKGPEIRTGFL DGKPIQLK+GQEIT+STDYTIKG+E MI MSYKKL +D++PG+ ILC+DGTI+ TVL C+  +G V+CRCEN+A LGERKNVNLPGV+VDLPTLTEKD++
Sbjct:   57 THEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDPPSGTVRCRCENTATLGERKNVNLPGVVVDLPTLTEKDKE 196          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.050e-28
Identity = 65/139 (46.76%), Postives = 90/139 (64.75%), Query Frame = 2
Query:    5 HEYHQETLNNLRTAMVNT-GILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDR 418
            HE H   + NL+ A+    G   A++LDTKGPEIRTG L+  KPI+L  G  + I TDY+  G+++ I  SY+KL   V+PG+ IL +DG++S  V+EC      V  R  N A++G +KN+NLPGV VDLP + EKD+
Sbjct:   94 HEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSCIACSYEKLPSSVKPGNTILIADGSLSVEVVECG--KDYVMTRVMNPAIIGNKKNMNLPGVKVDLPVIGEKDK 230          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.499e-27
Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKP-IQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            +H+YH + + N+R+AM  TG + A+MLDTKGPEIRTG ++D    + L  GQEI + T+    G    I + YK L   V+ G  IL +DG IS ++     + G V CR  N++ LGE KNV+LPG IV+LP ++EKD
Sbjct:   57 THDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNVHLPGAIVNLPAVSEKD 195          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.618e-26
Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 2
Query:    2 SHEYHQETLNNLR-TAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKD 415
            S++YHQ  ++N R  A    G   A+ LDTKGPEIRTG   D K I +KQG E+ I+TD  Y    D+  + + YK +   + PG +I   DG +SF VLE  V    ++ RC N+  +  RK VNLPG  VDLP L+EKD
Sbjct:   70 SYQYHQSVIDNAREAAKTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTDEQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEVLEV-VDDKTIRVRCLNNGNISSRKGVNLPGTDVDLPALSEKD 209          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.625e-24
Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            H + + NLR  M  TG   A++LDTKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  M+ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LGE K VNLPGV + LP L EKD++
Sbjct:   43 HGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQ 176          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.625e-24
Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            H + + NLR  M  TG   A++LDTKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  M+ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LGE K VNLPGV + LP L EKD++
Sbjct:   43 HGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQ 176          
BLAST of FC920308 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.054e-23
Identity = 55/136 (40.44%), Postives = 80/136 (58.82%), Query Frame = 2
Query:   14 HQETLNNLRTAMVNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERKNVNLPGVIVDLPTLTEKDRK 421
            H + + NLR  M  TG   A++LDTKGPEIRT  L+ G  + LK GQ  T +TD ++ G+  ++ ++Y+    D+  G+ +L  DG I   V    ++   V C+  N+  LGE K VNLPGV + LP L EKD++
Sbjct:   43 HGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTA--IEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQ 176          
The following BLAST results are available for this feature:
BLAST of FC920308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYC_ARATH8.816e-6380.71Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_TOBAC4.375e-6280.58Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_SOYBN2.171e-6178.57Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU5.348e-6076.43Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYK_EIMTE7.050e-2846.76Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK_DICDI3.499e-2745.32Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_ASPNG8.618e-2644.68Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYK1_ECOLI1.625e-2441.18Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO571.625e-2441.18Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK1_SALTY1.054e-2340.44Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]

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Properties
Property NameValue
Genbank descriptionC32006F09EF RVDevelop1 Citrus clementina cDNA clone C32006F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920308 ID=FC920308; Name=FC920308; organism=Citrus clementina; type=EST; length=427bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAGAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGGAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAAAAATGTTAATCTCCCAGGGGTTATTGTGGATCTCCCCACC
TTGACAGAGAAAGACAGGAAGATATCT
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