FC920319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 3.653e-101 Identity = 178/225 (79.11%), Postives = 197/225 (87.56%), Query Frame = 2 Query: 2 VISTTET-DSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 V++TT DS E L+ TFASRYV+ +P+FKMP SMPKEAAYQ++NDELMLDGNPRLNLASFV+TWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNM+AHLF+ PV DD+TAVGVGTVGSSEAIMLAGLAFKRKWQ KRK +GKP+DKPNIVTGANVQVCWEKFARYF GYYVM+P KAVE+VDENTICVAAILGSTL GEFED KLL+ Sbjct: 2 VLTTTSIRDSEESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTVGSSEAIMLAGLAFKRKWQSKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLKEGYYVMDPAKAVEIVDENTICVAAILGSTLTGEFEDVKLLN 226
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 6.230e-101 Identity = 180/224 (80.36%), Postives = 195/224 (87.05%), Query Frame = 2 Query: 2 VISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 V+S T + S ++STFASRYVR ++PRFKMPDNS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ D +TAVGVGTVGSSEAIMLAGLAFKRKWQ K K QGKP DKPNIVTGANVQVCWEKFARYF GYYVM+P KAVE+VDENTICVAAILGSTL+GEFED K L+ Sbjct: 2 VLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLN 225
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 364.385 bits (934), Expect = 3.092e-100 Identity = 176/224 (78.57%), Postives = 198/224 (88.39%), Query Frame = 2 Query: 2 VISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 V+S ++S ++STFASRYVR ++PRFKMP+NS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHLFN P+ + +TAVGVGTVGSSEAIMLAGLAFKRKWQ KRK +GKP DKPNIVTGANVQVCWEKFARYF GYYVM+P +AV++VDENTICVAAILGSTL+GEFED KLL+ Sbjct: 2 VLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLN 225
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.643e-93 Identity = 165/224 (73.66%), Postives = 189/224 (84.38%), Query Frame = 2 Query: 2 VISTTETDSREILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 V++ T T+ + + F SRYVR +P++++ +NS+PK+AAYQ+I DELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVN+IA LFN P+ + +TAVGVGTVGSSEAIMLAGLAFKRKWQ KRK +GKPYDKPNIVTGANVQVCWEKFARYF GYYVM+P KA E+VDENTICVAAILGSTL+GEFED K L+ Sbjct: 2 VLTKTATNDESVC-TMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMVDENTICVAAILGSTLNGEFEDVKRLN 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224
BLAST of FC920319 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.358e-46 Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 20 TDSR-EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLDGEFEDXKLLH 673 TD R E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L++ P + AVG T+GSSEA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T G +E + LH Sbjct: 7 TDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLH 224 The following BLAST results are available for this feature:
BLAST of FC920319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920319 ID=FC920319; Name=FC920319; organism=Citrus clementina; type=EST; length=675bpback to top |