FC920373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.005e-79 Identity = 154/202 (76.24%), Postives = 170/202 (84.16%), Query Frame = 2 Query: 86 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 MAAVG+++++PE+A EE C KGA+ KQGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI P L +P + ++ Sbjct: 1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 201
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.046e-74 Identity = 148/202 (73.27%), Postives = 163/202 (80.69%), Query Frame = 2 Query: 86 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 MAAVG+E + P +A EE C KGA+ KQGEGL +YYLQH+ ELQ R+K++NLNRLEAQRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI P L +P + ++ Sbjct: 1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 201
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 3.163e-57 Identity = 111/159 (69.81%), Postives = 127/159 (79.87%), Query Frame = 2 Query: 161 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P Sbjct: 9 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHP 167 HSP 2 Score: 25.409 bits (54), Expect = 3.163e-57 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 628 QHPELFESLGIAQTR 672 +HPE FE+LGIAQ + Sbjct: 165 KHPEHFEALGIAQPK 179
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.418e-57 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 131 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.418e-57 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 131 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.418e-57 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 131 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.418e-57 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 131 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.418e-57 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 131 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLY 189
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56 Identity = 113/179 (63.13%), Postives = 134/179 (74.86%), Query Frame = 2 Query: 152 KGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 + A +GEG R YY+Q I ELQL V +K NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV P+ RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 10 ESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 188
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 4.492e-56 Identity = 106/158 (67.09%), Postives = 125/158 (79.11%), Query Frame = 2 Query: 164 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 + E + QYY Q I + +L + QKT NL RLEAQRN LN+RVR+L+EE+QLLQEPGSYVGEV+K MGKNKVLVKVHPEGKYVV P+ RVALRNDSY L ILP+KVDPLV+LM VEK+PDSTY+M+GGL++QIKEIKEVIELP+ P Sbjct: 11 QSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHP 168 HSP 2 Score: 27.335 bits (59), Expect = 4.492e-56 Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 1 Query: 628 QHPELFESLGIAQTR 672 +HPELFESLGI Q + Sbjct: 166 KHPELFESLGIPQPK 180 The following BLAST results are available for this feature:
BLAST of FC920373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920373 ID=FC920373; Name=FC920373; organism=Citrus clementina; type=EST; length=689bpback to top |