FC920404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.162e-60 Identity = 122/246 (49.59%), Postives = 156/246 (63.41%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS--TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA------------EERPVPSFFLCPILQEIM 696 +TL+GACPE WSLVYEYLP GSL+DRL K N PL W++R RIA EI + L FLHS+K +VHGDLKP NILLDS L SK+ DFG C L+ P+ +S T G+ Y DPE +G LTPKSD YSFG+I+L+LLTGR + ++ EV+ A+ G L+ +LDPLAGDWP A +L L L+CCE RPD+ + + LE + + E R P +F+CPI QE+M Sbjct: 537 ITLIGACPEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLH------PNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVM 776
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.508e-55 Identity = 115/241 (47.72%), Postives = 146/241 (60.58%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPV---------PSFFLCPILQEIM 696 V LLGACPE LVYEYL NGSL++ +F + N PL W R R+ E+A GL FLHSSKPE IVH DLKP NILL+ SKI D G+ +LVT+ + +R++ G+ Y DPEYHRTG + PKSD Y+FG+IILQLLT R P G+ V AV G L+ +LD DWP L +GL+C E R+RPD+ ++ L++L V PS + CPIL+EIM Sbjct: 498 VLLLGACPENGCLVYEYLENGSLEEYIFHRKNKPPLPWFIRFRVIFEVACGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRLVETANSKVKKEGSNLRAPSHYFCPILREIM 738
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.773e-54 Identity = 116/252 (46.03%), Postives = 156/252 (61.90%), Query Frame = 1 Query: 7 LLGACPEAWSLVYEYLPNGSLQDRLF-RKSNVS-----PLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH--------------VAEERPVPSFFLCPILQEIM 696 LLGACPE SLVYEY+ NGSL++RL R+ NV PL W +R RIA EIAS L FLH+++P IVH DLKP NILLD SKI D G+ ++V D + + T P G+F Y DPEY RTGV+TP+SD Y+FG+I+LQL+T R +GLA + +A+ GK + ILD AGDWP A+ +V +GL+C E+ R+RPD+ ++ LE+L + P+ F CPI +++M Sbjct: 487 LLGACPERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVM 738
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2) HSP 1 Score: 206.453 bits (524), Expect = 1.165e-52 Identity = 112/245 (45.71%), Postives = 152/245 (62.04%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV-SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEER----------PVPSFFLCPILQEIMH 699 V LLGACPE +LVYEY+ NGSL+DRLF+ +N PL W +R RIA E+A+ L FLH SKP+ I+H DLKP NILLD SK+ D G+ +V D L + ++ T+P G+ Y DPEY RTG ++ KSD YSFG+I+LQLLT + + L V A+ S + ILD AG+WP R L L L C EL G++RPD+ ++ LE L E+ P+ F+CP+L+++M+ Sbjct: 536 VLLLGACPEQGALVYEYMENGSLEDRLFQVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFVESAMDSNDEFLKILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILPALENLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMN 780
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.987e-52 Identity = 106/244 (43.44%), Postives = 147/244 (60.25%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV-SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERP----------VPSFFLCPILQEIMH 699 V LLGACPE LVYEY+ NGSL DRL ++ P+ W +R RIA E+AS L FLH SKP I+H DLKP NILLD SK+ D G+ +V +D + + + T+P G+ Y DPEY RTG+++PKSD YS G++ILQL+T + + + V A+ + +ILD AG WP R L LGL C E+ R+RPD+ ++ LE+L ++ PS F+CP+L+ +M+ Sbjct: 546 VLLLGACPERGCLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIGDDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQNLLSRTPSGPPSHFICPLLKGVMN 789
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.860e-50 Identity = 110/247 (44.53%), Postives = 152/247 (61.54%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV-TEDTLYLP-SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV---SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEER----------PVPSFFLCPILQEIM 696 V LLGACP+ +LVYEY+ NGSL+DRLF+ ++ P+ W R RIA E+AS L FLH SKP I+H DLKP NILL+ SK+ D G+ ++ D L + ++ T+P G+ Y DPEY RTG ++PKSD Y+FG+IILQLLTG+ + L V A+ + +L ILD AG+WP R+L L LQC EL ++RPD+ ++ LE L ++ PS F CP+L+++M Sbjct: 516 VLLLGACPDHGALVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSLSAAPSQPPSHFFCPLLKDVM 762
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45 Identity = 104/245 (42.45%), Postives = 146/245 (59.59%), Query Frame = 1 Query: 1 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL----------VKELEQLHVAEE---RPVPSFFLCPILQEIM 696 VTL+GACPE+ SL+Y+Y+PNGSL+D ++NV L W+ R RIA+EI S L FLHS+ P I+HG+LKP ILLDS L +KI D+GI +L+ D L S P+ DP Y + +T +SD Y+FG+I+LQLLT R G+ +V+ A+ +S++LD AGDWP ++L ++ ++CC+ RPD+ L V E A + R PS +LCPI QE+M Sbjct: 516 VTLMGACPESRSLIYQYIPNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP-CIIHGNLKPSKILLDSNLVTKINDYGISQLIPIDGL-----------DKSDPHVDPHYFVSREMTLESDIYAFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLAVVLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVM 748
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36 Identity = 89/230 (38.70%), Postives = 131/230 (56.96%), Query Frame = 1 Query: 1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----GLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH---VAEERPVPS 663 V+LLG C + LVYEY+PNGSLQD L + PL R RIA A G+ +LH+ I+H D+KP NILLDS+++ K+ DFGI +L+ D + H +T KG+ Y DPEY+ + LT KSD YS G++ L++LTG P+ + EV A G + S++D G + +R ++L ++CC+ RP + +V+ELE ++ EE+P S Sbjct: 688 VSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFR-QPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRNIVREVNEACDAGMMMSVIDRSMGQYSEECVKRFMELAIRCCQDNPEARPWML-EIVRELENIYGLIPKEEKPYSS 915
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.626e-31 Identity = 88/225 (39.11%), Postives = 126/225 (56.00%), Query Frame = 1 Query: 1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG----LAGEVRRAVSCGK----LSSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 633 V LLG C + LVYEY+PNGSL+D L K+ V L W R +IA GL +LH I+H D+K NILLD L++K+ DFG+ +LV + H +T KG+ Y DPEY+ T LT KSD Y FG+++L+LLTG+ P+ + EV++ + + L +LD +G+ F + VD+ LQC E G RP ++ +V+ELE + Sbjct: 691 VKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPE----KAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGF--EKYVDVALQCVEPEGVNRPTMS-EVVQELESI 907
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30 Identity = 82/217 (37.79%), Postives = 116/217 (53.46%), Query Frame = 1 Query: 1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 615 V L+G C EA LVYEY+ NGSL D L S+ PL W R +IA + A GL +LH+ I+H D+K NILLD + +K+ DFG+ R ED H S+ KG+ Y DPEY+ + LT KSD YSFG+++ +LL+G+ PV + R + G + I+DP +A + R+ ++ QC E G RP + +V Sbjct: 663 VPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLT-----HVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIV 874 The following BLAST results are available for this feature:
BLAST of FC920404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920404 ID=FC920404; Name=FC920404; organism=Citrus clementina; type=EST; length=700bpback to top |