FC920416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920416 vs. ExPASy Swiss-Prot
Match: RNZN_ARATH (Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3) HSP 1 Score: 314.694 bits (805), Expect = 2.759e-85 Identity = 149/196 (76.02%), Postives = 171/196 (87.24%), Query Frame = 3 Query: 81 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVL 668 + MQ++GY +EGLSI GHETCIIFPSL +AFDIGRCP RA+SQ+FLFISH+HMDHIGGLPMYVATRGLY+MKPPTIIVP+ IKE VE LFE+HR++D SEL H LVGLD+GEEF +RKDL VKAFKT+HVIQSQGYVVYS K KLK+EY+GL G+EIK LK SG EIT ++ TPEVAFTGDT SDF+VDE N D L Sbjct: 5 KAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMYVATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKVKAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVAFTGDTTSDFVVDETNADAL 200
BLAST of FC920416 vs. ExPASy Swiss-Prot
Match: RNZN_WHEAT (Nuclear ribonuclease Z (Fragment) OS=Triticum aestivum GN=ELAC PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.679e-72 Identity = 125/170 (73.53%), Postives = 151/170 (88.82%), Query Frame = 3 Query: 87 MQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVT 596 ++++GY VEG+SI GHETC+IFP+L LAFDIGRCP RA++Q+FLFISHAH+DHIGGLPMYVATRGLYR++PPTI VP ++E VE+LF++HR MD SELNHTLV LD+GEE+ +R+DL V+AFKTYH I SQGYV+YSVKQKLKQ+YLGLPG EIK+LK SG EIT TVT Sbjct: 7 LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 176
BLAST of FC920416 vs. ExPASy Swiss-Prot
Match: RNZC_ARATH (Ribonuclease Z, chloroplastic OS=Arabidopsis thaliana GN=CPZ PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.682e-66 Identity = 115/196 (58.67%), Postives = 152/196 (77.55%), Query Frame = 3 Query: 81 RGMQLQGYKVEGLSIAGHETCIIFPSLDLAFDIGRCPSRALSQNFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPSCIKEDVEQLFEIHRRMDHSELNHTLVGLDVGEEFCMRKDLFVKAFKTYHVIQSQGYVVYSVKQKLKQEYLGLPGDEIKKLKSSGTEITYTVTTPEVAFTGDTMSDFIVDEANIDVL 668 +G++L+ Y +EG+S+ GHETC+I P L FDIGRCPSRA+ Q FLFI+HAH+DHIGGLPMYVA+RGLY ++PP I VP IKEDVE+L EIHR M ELN L+ L VGE + +R D+ V+ F T+HVI SQGYV+YSV++KL+++Y L G +I+K+K SG EIT T+ +PE+AFTGDT S++++D N D L Sbjct: 74 KGVELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMYVASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRNDIVVRPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFTGDTTSEYMLDPRNADAL 269 The following BLAST results are available for this feature:
BLAST of FC920416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920416 ID=FC920416; Name=FC920416; organism=Citrus clementina; type=EST; length=670bpback to top |