FC920459

Overview
NameFC920459
Unique NameFC920459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15077 contig Ccv1_Contig15077:763..1463. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.497e-111
Identity = 197/224 (87.95%), Postives = 209/224 (93.30%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KFK+AVEAVK LR++P ANDQYLPPFV+VDE+GKAVGPIVDGDAVVT NFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLP+ YLVSPPEI+RTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYF   +EEYVEIPSDSGITFNVQPKMKALEIAE+A+ AILS +F Q    LPNSDMVGHTGDIEATVVACKAADEAVK IIDA
Sbjct:  235 YKFKNAVEAVKTLRQEPKANDQYLPPFVVVDESGKAVGPIVDGDAVVTLNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPNRYLVSPPEIERTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFKPEMEEYVEIPSDSGITFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDA 458          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 2.310e-109
Identity = 192/224 (85.71%), Postives = 205/224 (91.52%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KFKSAVEA+KKLRE+P ANDQYLPPFVIVDENGK VGPIVDGDAVVT NFRADRMVMLAKALEYE+FD FDRVRFPKI YAGMLQYDGELKLPSHYLVSPPEI+RTSGEYLVHNGV TFACSETVKFGHVTFFWNGNRSGYF+  +EEYVEIPSD GITFNVQPKMKA+EIAE+A+ AILS +F Q    +PN DMVGHTGD+EATVV CKAADEAVK IIDA
Sbjct:  232 YKFKSAVEAIKKLREEPKANDQYLPPFVIVDENGKPVGPIVDGDAVVTINFRADRMVMLAKALEYENFDTFDRVRFPKIHYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVHNGVHTFACSETVKFGHVTFFWNGNRSGYFNPEMEEYVEIPSDVGITFNVQPKMKAIEIAEKARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDA 455          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.146e-108
Identity = 191/224 (85.27%), Postives = 205/224 (91.52%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            HKFK+AVEA+K LR++PN +DQYLPPFVIVDENGK VGPIVDGDAVVTFNFRADRMVM+AKALEY DFDKFDRVRFPKIRYAGMLQYDGELKLPS YLV PPEIDRTSGEYL +NGVRTFACSETVKFGHVTFFWNGNRSGYF+  +EEYVEIPSDSGITFNVQPKMKA+EIAE+ + AILS++F Q    LPNSDMVGHT  IEATVVACKAADEAVK IIDA
Sbjct:  164 HKFKNAVEAIKTLRQEPNTSDQYLPPFVIVDENGKPVGPIVDGDAVVTFNFRADRMVMIAKALEYADFDKFDRVRFPKIRYAGMLQYDGELKLPSKYLVEPPEIDRTSGEYLTYNGVRTFACSETVKFGHVTFFWNGNRSGYFNPQMEEYVEIPSDSGITFNVQPKMKAVEIAEKGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDA 387          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 390.193 bits (1001), Expect = 5.689e-108
Identity = 192/224 (85.71%), Postives = 204/224 (91.07%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            HKFK+AVEAVK LR++P ANDQYLPPFVIVDE+GKAVGPIVDGDAVVTFNFRADRMVM AKALEYEDFDKFDRVR+PKIRYAGMLQYDGELKLPS YLVSPPEIDRTSGEYL HNGV TFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGI+FNVQPKMKALEI E+A+ AILS +F Q    +PN DMVGHTGDIEATVVAC+AAD AVK I DA
Sbjct:  234 HKFKNAVEAVKTLRKEPGANDQYLPPFVIVDESGKAVGPIVDGDAVVTFNFRADRMVMHAKALEYEDFDKFDRVRYPKIRYAGMLQYDGELKLPSRYLVSPPEIDRTSGEYLTHNGVSTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGISFNVQPKMKALEIGEKARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDA 457          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.390e-106
Identity = 190/224 (84.82%), Postives = 202/224 (90.18%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            HKFKSA+EAVK LR +P ANDQYLP FVIVD+NGKAVGPIVDGDAVVTFNFRADRMVM AKALEY+DFDKFDRVR P IRYAGMLQYDGELKLPS YLVSPP IDRTSGEYL HNGVRTFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGI+FNVQPKMKALEIAE+A+ AILS +F Q    LPN DMVGHTGDIEATVVAC+AAD AV+ I+DA
Sbjct:  236 HKFKSALEAVKTLRAEPGANDQYLPSFVIVDDNGKAVGPIVDGDAVVTFNFRADRMVMHAKALEYKDFDKFDRVRVPDIRYAGMLQYDGELKLPSRYLVSPPLIDRTSGEYLAHNGVRTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGISFNVQPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDA 459          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 1.549e-105
Identity = 187/224 (83.48%), Postives = 201/224 (89.73%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KFKSA+EAVK LR QP ANDQYLPPFVIVD++G AVGP++DGDAVVT NFRADRMVMLAKALEY DFD FDRVR PKIRYAGMLQYDGELKLPS YLVSPPEIDRTSGEYLV NG+RTFACSETVKFGHVTFFWNGNRSGYFD+  EEYVE+PSDSGITFNV P MKALEIAE+A+ A+LS +F Q    LPN DMVGHTGDIEATVVACKAADEAVK I+DA
Sbjct:  235 YKFKSALEAVKTLRAQPKANDQYLPPFVIVDDSGNAVGPVLDGDAVVTINFRADRMVMLAKALEYADFDNFDRVRVPKIRYAGMLQYDGELKLPSRYLVSPPEIDRTSGEYLVKNGIRTFACSETVKFGHVTFFWNGNRSGYFDATKEEYVEVPSDSGITFNVAPNMKALEIAEKARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDA 458          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.450e-103
Identity = 185/224 (82.59%), Postives = 200/224 (89.29%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            HKFK  VEAVKKLR++PNANDQYL PFVIVD+NGK V  I+DGDAVVTFNFRADRMVMLAKALEYE+FDKFDRVR PKIRYAGMLQY GEL+LPSHYLVSPPEI R SGEYLV NGVRTFACSETVKFGHVTFFWNGNRSGYF+  LEEYVEIPSDSGITFNV+PKMKALEIAER + AILS +F Q    LPN DMVGHTGDI+AT+ ACK+ADEAVK I++A
Sbjct:  235 HKFKDPVEAVKKLRQEPNANDQYLAPFVIVDDNGKPVAAILDGDAVVTFNFRADRMVMLAKALEYENFDKFDRVRVPKIRYAGMLQYHGELQLPSHYLVSPPEIARHSGEYLVRNGVRTFACSETVKFGHVTFFWNGNRSGYFNEKLEEYVEIPSDSGITFNVKPKMKALEIAERTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEA 458          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.530e-55
Identity = 115/218 (52.75%), Postives = 144/218 (66.06%), Query Frame = 2
Query:   35 FKSAVEAVKKLR-EQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVK 685
            F SA EA++  R E P   DQYLP FVI D NGK VG I DGD+VV  NFR DR + ++ A   ++FDKFDR   P + YAG++QYDG+LKLP  +LV+PP IDRT GEY+  + +  +A SET K+GHVT+FWNGN+SGYFD N EEY EI SD  I F+  P+MKAL I E  +KA+   +         N DMVGHTG+  ATV A +  D  V+
Sbjct:  234 FSSAKEAIETFRSENPKIIDQYLPSFVISD-NGKPVGKIQDGDSVVFTNFRGDRAIEISLAFTEKNFDKFDRGPLPNVLYAGIMQYDGDLKLPERFLVAPPAIDRTLGEYMASSNIPQYALSETQKYGHVTYFWNGNKSGYFDQNSEEYREILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVE 449          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.530e-55
Identity = 115/218 (52.75%), Postives = 144/218 (66.06%), Query Frame = 2
Query:   35 FKSAVEAVKKLR-EQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVK 685
            F SA EA++  R E P   DQYLP FVI D NGK VG I DGD+VV  NFR DR + ++ A   ++FDKFDR   P + YAG++QYDG+LKLP  +LV+PP IDRT GEY+  + +  +A SET K+GHVT+FWNGN+SGYFD N EEY EI SD  I F+  P+MKAL I E  +KA+   +         N DMVGHTG+  ATV A +  D  V+
Sbjct:  234 FSSAKEAIETFRSENPKIIDQYLPSFVISD-NGKPVGKIQDGDSVVFTNFRGDRAIEISLAFTEKNFDKFDRGPLPNVLYAGIMQYDGDLKLPERFLVAPPAIDRTLGEYMASSNIPQYALSETQKYGHVTYFWNGNKSGYFDQNSEEYREILSDV-IPFDQSPEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVE 449          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS185) GN=gpmI PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 81/224 (36.16%), Postives = 128/224 (57.14%), Query Frame = 2
Query:   32 KFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPE-IDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ++ +AV A++   E+ N ND+++    I D +G+ V  + DGDA++  NFRADR   + ++    DFD F+R   PK+ +  + +Y G++K P  Y   P E +  T GE L   G      SET K+ HVTFF+NG +   F+   E+ + I S    T+++QP+M + E+ ++   AI S ++    C  PN DMVGHTG+ +A V AC+A D  +  ++DA
Sbjct:  215 QYDNAVTALEAAYER-NENDEFVSSSAITDADGQ-VATLQDGDALIFMNFRADRARQITRSFINPDFDGFERAVVPKMHFVTLTEYAGDIKAPIAY---PSENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDA 431          
The following BLAST results are available for this feature:
BLAST of FC920459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
PMGI_MESCR5.497e-11187.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO2.310e-10985.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU1.146e-10885.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG1_ARATH5.689e-10885.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH2.390e-10684.82Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMGI_MAIZE1.549e-10583.482,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC1.450e-10382.592,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN9.530e-5552.75Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC9.530e-5552.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB81.582e-3336.162,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC32008F09EF RVDevelop1 Citrus clementina cDNA clone C32008F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920459 ID=FC920459; Name=FC920459; organism=Citrus clementina; type=EST; length=701bp
GGGATGCCCAAGTTCTTGGAGACACTCACACAAGTTTAAGAGCGCCGTTG
AAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAGTACTTA
CCTCCATTTGTCATTGTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGT
AGATGGTGATGCAGTTGTAACTTTCAACTTCCGAGCTGATCGAATGGTTA
TGCTTGCTAAGGCCCTTGAATATGAAGATTTTGACAAATTTGATCGAGTT
CGGTTCCCTAAAATCCGTTATGCTGGAATGCTTCAATATGATGGGGAGTT
GAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGACAGAACAT
CTGGTGAATATTTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAG
ACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACCGCTCTGG
GTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTG
GAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCTGAG
AGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGGTACGTGTTA
CCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAACAG
TGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAAGATATCATTGATGCA
A
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