FC920489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 7.210e-101 Identity = 181/203 (89.16%), Postives = 191/203 (94.09%), Query Frame = 2 Query: 98 MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKL 706 MDVIKTQQIS+R IEKV+VHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS +G VDV+NSYAVPFEEDDKDP IWFLDHNYHESM+ MFKRINAKEHVVGWYSTGPKLRENDLD+H LF+ YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENATQKSQKVFVHV +EIAAHEVEEIGVEHLLRDVKDTTISTLA EVT KL Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKL 203
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68 Identity = 121/185 (65.41%), Postives = 153/185 (82.70%), Query Frame = 2 Query: 149 IVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGK 703 IVHP VLLS+VD+YNRVAKDT KRVVG LLGS+ KG VDVSN Y +PFEED+ +P IWFLDHN+HE+M++MFK+INA+E+VVGWYSTGPK+R D DI++LF Y PNPV+VIIDV PKELGIPTK+Y VEE+ ++ ++ + + F H+PS I A E EEI +EHLLRDVKD++IS+L ++T K Sbjct: 9 IVHPTVLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMR-FQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDK 192
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66 Identity = 118/191 (61.78%), Postives = 153/191 (80.10%), Query Frame = 2 Query: 137 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKL 706 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQV 195
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66 Identity = 118/191 (61.78%), Postives = 153/191 (80.10%), Query Frame = 2 Query: 137 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKL 706 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQV 195
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66 Identity = 118/191 (61.78%), Postives = 153/191 (80.10%), Query Frame = 2 Query: 137 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKL 706 ++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS K +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+ TL+ +T ++ Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQV 195
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 247.669 bits (631), Expect = 4.882e-65 Identity = 121/200 (60.50%), Postives = 158/200 (79.00%), Query Frame = 2 Query: 113 TQQISSRPIEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGS-SFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKL 706 +Q++S + KVIVHPLVLLS+VD++NR+ K +KRVVGVLLG KG +DVSNS+AVPF+EDDKD +WFLDH+Y E+MY MFK++NA+E VVGWY TGPKL +ND+ I++L Y PN VLVIID +PK+LG+PT+AY VEEV ++ + S K F HVPSEI A E EE+GVEHLLRD+KDTT+ +L+ ++T +L Sbjct: 3 SQEVS---VNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTS-KTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQL 198
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64 Identity = 113/190 (59.47%), Postives = 151/190 (79.47%), Query Frame = 2 Query: 140 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLQ 709 ++VIVHPLVLLS VD+YNR AK T++RVVG+LLG + V+V+NSYA+PFEED+K+ +WFLDHN+ ESM MFK+INA E +VGWY TGP+LR +DL+I+ L Y+PNPVLVIIDV+PK +G+PT AY+ ++E++++ + KS + FVH+PS I A E EEIGVEHLLRD +D ++ TLA VT + Q Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDDGS-KSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGTLATRVTQQAQ 203
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.569e-63 Identity = 116/190 (61.05%), Postives = 146/190 (76.84%), Query Frame = 2 Query: 146 VIVHPLVLLSIVDNYNRVA--KDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLQ 709 V V PLVLLS+VD+YNR K KRVVGVLLG + V VSNS+AVPFEEDDKDP +WFLDHNY ESM MFK++NA+E ++GWY +GPKLR +DLDI++LF Y PNP+LVI+DVQPKE G+PT AY+ V+E+K++ T S K FVH PS I A E EEIGVEHLLRD++D + TL+ +T +++ Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTS-KTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITNQMR 204
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: RPN8_CANGA (26S proteasome regulatory subunit RPN8 OS=Candida glabrata GN=RPN8 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.056e-51 Identity = 98/191 (51.31%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 140 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLQ 709 + V + PLVLLS++D+Y R KR VGV+LG S T+ V+NS+A+PFEED+K+ +WFLDHNY ESM M K+INAKE ++GWY +GPKLR +DL I++LF Y NP+L+I+DV+ +++G+PT AY VE+VK++ T ++K F+H+P + A E EEIGVEHLLRDV+D L+ +T +L+ Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDVWFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLLLIVDVKQQDVGLPTDAYMAVEQVKDDGT-STEKTFLHLPCTVEAEEAEEIGVEHLLRDVRDQAAGGLSIRLTNQLK 195
BLAST of FC920489 vs. ExPASy Swiss-Prot
Match: RPN8_ASHGO (26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii GN=RPN8 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.379e-51 Identity = 99/191 (51.83%), Postives = 140/191 (73.30%), Query Frame = 2 Query: 140 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLQ 709 E+V V PLVLLS++D+Y R+ KR VGVLLG + T+ V+NS+A+PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF Y N +L+I+DV+ + +G+PT AY +EEVK++ + +++ FVH+P+ I A E EEIGVEHLLRDV+D L+ +T +L+ Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDDGS-STERTFVHLPTAIEAEEAEEIGVEHLLRDVRDQAAGNLSLRLTNQLK 195 The following BLAST results are available for this feature:
BLAST of FC920489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920489 ID=FC920489; Name=FC920489; organism=Citrus clementina; type=EST; length=732bpback to top |