FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.465e-95 Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 1 Query: 88 ASAMVLDPKPVSEPPPSTRSD--LTEQWSD-EDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 A+AMVLDPKP +E P+TR + +T+ SD EDDLY+RLKSLQRQLEFI+IQEEYVKDE KNL+RE LRAQEEVKRIQSVPLVIGQFMEM+DQNN IVGSTTGSNYYVRILSTINRELLKPSASV L RHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK Sbjct: 2 ATAMVLDPKP-AEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 207
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.914e-95 Identity = 181/205 (88.29%), Postives = 188/205 (91.71%), Query Frame = 1 Query: 85 AASAMVLDPKPVSEPPPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 A ++MVLDPK DL+ +DE+DLY RLKSL+RQLEF DIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK Sbjct: 5 AVASMVLDPKA-----SPALMDLST--ADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 202
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 8.631e-80 Identity = 146/190 (76.84%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 130 PPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P + S L + D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L AQEEVKRIQS+PLVIGQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GK Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 8.631e-80 Identity = 146/190 (76.84%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 130 PPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P + S L + D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L AQEEVKRIQS+PLVIGQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GK Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 8.631e-80 Identity = 146/190 (76.84%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 130 PPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P + S L + D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L AQEEVKRIQS+PLVIGQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GK Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 8.631e-80 Identity = 146/190 (76.84%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 130 PPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P + S L + D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L AQEEVKRIQS+PLVIGQF+E VDQN IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+HSNALVDVLPPEADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GK Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.472e-79 Identity = 149/200 (74.50%), Postives = 169/200 (84.50%), Query Frame = 1 Query: 100 VLDPKPVSEPPPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V D K + P T +L + +DLY++ K LQR LEF+++QEEY+KDEQ+NLK+E L AQEEVKRIQSVPLVIGQF+E VDQN GIVGSTTGSNYYVRILSTI+RELLKPSASVALH+HSNALVDVLPPEADSSIS+L EKPDV Y+DIGG D QKQEIREAVELPLTH ELY+QIGI+PPRGVL+YGPPG GK Sbjct: 15 VTDAKGLPFAGPQTFDEL-----ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGK 209
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.055e-77 Identity = 142/190 (74.74%), Postives = 164/190 (86.32%), Query Frame = 1 Query: 130 PPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P + S L + D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L AQEEVKRIQS+PLVIGQF+E VDQN IV STTGSNYYVR++STI+RELLKP+ASVALH+HSNALVDVLPP ADSSI +L+ +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIGIDPPRGVL+YGPPG GK Sbjct: 23 PQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGK 212
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.167e-76 Identity = 139/178 (78.09%), Postives = 161/178 (90.45%), Query Frame = 1 Query: 166 SDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +D D Y+ LK LQR LE+I +QEEY+KDEQ++LKREL+RAQEE+KRIQSVPLVIGQFME +DQN GIV S+TGSNY VRILST++RE LKPS+SVALHRHSNALVD+LPPEADSSI++L ++EKPDVTY D+GG D+QKQEIREAVELPLT +LYKQIGIDPPRGVLLYGPPGTGK Sbjct: 36 NDGSDEYATLKRLQRHLEYIQLQEEYIKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGK 213
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.092e-74 Identity = 135/178 (75.84%), Postives = 161/178 (90.45%), Query Frame = 1 Query: 166 SDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 ++E DLY+R K+L+RQLE +D+QE ++K++ K+LKREL+RAQEEVKRIQSVPLVIGQF+E +DQN IVGSTTGSNY VRILST++RELLKPSASVAL RHSNALVD+LPPEADSSIS+L E+PDV+Y D+GG D+QKQE+REAVELPLT +LY+QIGIDPPRGVLLYGPPGTGK Sbjct: 4 TEEIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGK 181 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |