FC920531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: Y1010_HAEIN (Uncharacterized oxidoreductase HI1010 OS=Haemophilus influenzae GN=HI1010 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 57/206 (27.67%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIR-SASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 V +GL + A S I +G +++ ++K G +A+ D ++ A+V+++ + Q + + FG G+ K L+ G +++ ST+ Q + + TE ++DA VS G ++ G+ + SG A E +P L A +Y E+G G+ +K+V+ LL GVH+ A EA++L + GI +YD+ Sbjct: 8 VAVIGLGSMGMGAAVSCINAGLTTYGIDLNPVALEKLKAAGAKAVAANGYDFAHELDAVVILVVNAAQANAVLFGENGIAKKLKAGTAVMVSSTMAAQDAQIISQKLTELG--LIMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALASKAGIPLDVMYDV 211
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: YGBJ_ECOLI (Uncharacterized oxidoreductase ygbJ OS=Escherichia coli (strain K12) GN=ygbJ PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 62/207 (29.95%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLG--GIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 VG VGL + A S +R+G +++ G G+ + A K + AL+V++ + Q+ + FG GV + L+ G +++ STI + Q++ D ++DA VS G + NG+ + SG A ER P L A+ +Y E G GS +K+++ LL GVH+ A EA++L + GI +YD+ Sbjct: 9 VGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGACGVSDNAATFAEK-LDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLE--MLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDV 212
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 61/211 (28.91%), Postives = 109/211 (51.66%), Query Frame = 2 Query: 77 MASK--VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 MASK VGF+GL MA +LI+ GY + +++ + +F G ++SP D + ++ ++ +++ G G+LK ++KG+++I STI PS ++L K + A +DA VS G+ +G G N A+ L M + ++ G +G+G K+ N++L + +I + EA++LG++ G+ P L I Sbjct: 35 MASKTPVGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNV-LYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKI 242
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_ARATH (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 66/227 (29.07%), Postives = 108/227 (47.58%), Query Frame = 2 Query: 53 SNFTFNSKMASKVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQ--KGAVIILQSTILPSHMQKLE--------KTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 S+ + NS VGF+GL M +LIR+GYKV +I+ ++ F +G +P + +D ++ ++ + D++ G G+L G + A+ I STI P +K+ K +N E ++DA VS G+ G G +A ARP L +M +T I+ G G GS K+ N+L V ++ + EA++LG GI L ++ Sbjct: 28 SSSSQNSNQFQNVGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRT-SIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGISASTLTEV 253
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 58/211 (27.49%), Postives = 108/211 (51.18%), Query Frame = 2 Query: 77 MASK--VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 MASK VGF+GL MA +L++ GY + +++ + +F G ++SP + + ++ ++ +++ G G+LK ++KG+++I STI PS ++L K + A +DA VS G+ +G G + A+ L M + ++ G +G G K+ N++L + +I + EA++LG++ G+ P L I Sbjct: 35 MASKTPVGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNV-VYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKI 242
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: YKWC_BACSU (Uncharacterized oxidoreductase ykwC OS=Bacillus subtilis GN=ykwC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 49/203 (24.14%), Postives = 93/203 (45.81%), Query Frame = 2 Query: 77 MASKVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHP 685 M +GF+GL MA+ ++ G+ V + + + G I + D K+ ++ ++ + +++++FG G+++ ++GA +I +T PS +K+ + E + +DA VS G NG I G A E P S M + + ++G G+G KM N + +I EA++ + G+ P Sbjct: 1 MKKTIGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKE--KALFALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQ-YQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEP 200
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: YIHU_SHIFL (Uncharacterized oxidoreductase yihU OS=Shigella flexneri GN=yihU PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISL 661 + F+GL + MA++L++ G++++ F+++ V G +A+P A KD ++ ++ + D + ++ FG GV +GL A++I STI P KL + ++D V R + G ++ G + +ERA P L AM L I G G G ++K++N+ + S EA L Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFS--MMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSEL-INAGGPGMGIRVKLINNYMSIALNALSAEAAVL 191
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: YIHU_ECOLI (Uncharacterized oxidoreductase yihU OS=Escherichia coli (strain K12) GN=yihU PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISL 661 + F+GL + MA++L++ G++++ F+++ V G +A+P A KD ++ ++ + D + ++ FG GV +GL A++I STI P KL + ++D V R + G ++ G + +ERA P L AM L I G G G ++K++N+ + S EA L Sbjct: 4 IAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFS--MMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSEL-INAGGPGMGIRVKLINNYMSIALNALSAEAAVL 191
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 56/217 (25.81%), Postives = 108/217 (49.77%), Query Frame = 2 Query: 56 NFTFNSKMASK-VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 N + S +SK VGF+GL A +LI+ G+ + F++S +++ G + SP + K+ +V ++ + +++ G G+ + ++ G +++ STI P+ +++ ++ T ++D VS G G G A+ +L M K + + G++G G K+ N+L+ G+ +IA EA++LGV+ G+ P L I Sbjct: 13 NVRYMSTSSSKTVGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQST--MLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNI-VHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKKLAGI 226
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_BOVIN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 58/211 (27.49%), Postives = 103/211 (48.82%), Query Frame = 2 Query: 77 MASK--VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 MASK VGF+G+ MA +L++ GY + +++ +F G +SP D + ++ ++ + + G G+LK ++KG+++I STI P ++L K + A +DA VS G+ +G G A+ L M + ++ G +G G K+ N+LL + +I + EA++LG++ G+ P L I Sbjct: 36 MASKTPVGFIGVGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVGGVEEEFAAAQELLGCMGSNV-VYCGAVGTGQAAKICNNLLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243 The following BLAST results are available for this feature:
BLAST of FC920531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920531 ID=FC920531; Name=FC920531; organism=Citrus clementina; type=EST; length=703bpback to top |