FC920558

Overview
NameFC920558
Unique NameFC920558
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920558_ssr5 microsatellite FC920558_ssr5:5..25. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14655 contig Ccv1_Contig14655:79..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 8.985e-85
Identity = 159/207 (76.81%), Postives = 179/207 (86.47%), Query Frame = 2
Query:   71 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            + IL IGGTGYIGKFIVEAS KAGH TFVLVREST+S P+K++L+D FK+ GV  V GD+ +HESLVKAIKQVDVVISTVGHALLADQVK+IAAIKEAGNVKRFFPSEFGNDVDRVH AVEP K+ ++ KA+IRR VEAEGIP+TYV ++FF GY LPNL QPGA  PP DKVVI G GN K V+NKE+DIGTYTI AVDDP+TLNK
Sbjct:    5 SKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRVH-AVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNK 210          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.076e-73
Identity = 141/212 (66.51%), Postives = 165/212 (77.83%), Query Frame = 2
Query:   59 VSEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNKT 691
            VSE + IL IGGTGYIGK++VE S K+GHPTF L+REST+  P KS+L+D FK+ GV ++ GD+ N ESL+KAIKQVDVVISTVG     DQV II AIKEAGN+KRF PSEFG DVD    A+EP  S + +K +IRR +EAEGIPYTYV   +F  +FLPNL Q  A  PPRDKVVIFGDGNPK +Y KE+DI TYTI+AVDDPRTLNKT
Sbjct:    3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHAR-AIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKT 213          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.916e-72
Identity = 144/212 (67.92%), Postives = 165/212 (77.83%), Query Frame = 2
Query:   62 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQ--PGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            +E + IL IGGTGYIGKF+VEAS KAGH TF LVRE+T+S P K + +  FK+LGV I+ GD+ +HESLVKAIKQVDVVISTVG   + DQ KII+AIKEAGNVKRF PSEFG DVDR   AVEP KS +  K +IRR +EAEGIPYTY  +  F GY+LP L+Q  PG T+PPRDKV I GDGN K V NKE+DI  YTIKAVDDPRTLNK
Sbjct:    3 TEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRT-SAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNK 213          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.823e-61
Identity = 127/216 (58.80%), Postives = 154/216 (71.30%), Query Frame = 2
Query:   77 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-----------TVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            IL +G TG IG+ +V AS+KAG+PT+ L+R++             +  SK +LL  FK  GV ++ GD+ +HE+LVKAIKQVD VI T G  L+ DQVKII AIKEAGNVKRFFPSEFG DVDR H AV+P +  +D KA IRR VEAEG+PYTY+  + F GYFL NL Q  AT PPRDKV+I GDGN K  Y  E D+GTYTI+A +DPRTLNK
Sbjct:    7 ILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELLQSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFFPSEFGLDVDR-HDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNK 221          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.048e-61
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 2
Query:   77 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES----------TVSGP-SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            IL +G TG IG+ IV AS+KAG+PT+ LVR++          T + P +K +L+D++++LGV ++ GD+ +HE+LVKAIKQVD+VI   G  L+ DQVKII AIKEAGNVK+FFPSEFG DVDR H AVEP +  ++ KA IRR +EAEG+PYTY+  + F GYFL NL Q   T PPRDKVVI GDGN K  Y  E D+GT+TI+A +DP TLNK
Sbjct:    7 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNK 221          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.484e-59
Identity = 123/216 (56.94%), Postives = 155/216 (71.76%), Query Frame = 2
Query:   77 ILSIGGTGYIGKFIVEASVKAGHPTFVLVREST--VSGP---------SKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            IL +G TG IG+ IV AS+KAG+PT+ LVR+++  V+ P         +K +LL +++  GV ++ GD+ +HE+LV AIKQVD VI   G  L+ DQVK+I AIKEAGNVKRFFPSEFG DVDR H AVEP +  ++ KA IRR VE+EG+PYTY+  + F GYFL NL Q  AT PPRDKVVI GDGN +  Y  E D+GTYTI+A +DP TLNK
Sbjct:    7 ILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNK 221          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.764e-56
Identity = 114/210 (54.29%), Postives = 144/210 (68.57%), Query Frame = 2
Query:   62 SEMASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            SE + IL +GGTGY+G+ +V AS + GHPT  LVR++  S P+K+ LL  F++ GV ++ GD+ +  SLV A+K  DVVIS +G   +ADQ +++ AIKEAGNVKRFFPSEFG DVDR  G VEP KS    K  IRRA EA GIPYTY  + FF G+ LP + Q  A  PP DK V+ GDG+ K V+ +E DI TYT+ A DDPR  NK
Sbjct:    3 SEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT-GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENK 211          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.470e-50
Identity = 106/214 (49.53%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   71 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNKT 691
            + +L +GGTGY+G+ IV+AS++ GH TF+L R        K Q+L  FK  G  +V     +H+SLV A+K VDVVI T+       H LL  Q+K++ AIK+AGN+KRF PSEFG D   +  A+EP + T+D K  +R+A+E   IP+TY+ +  F GYF  NL Q     PPRDKV+++GDGN K VY  EDD+ TYTIK +DDPRTLNKT
Sbjct:    4 SKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKT 216          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45
Identity = 100/206 (48.54%), Postives = 135/206 (65.53%), Query Frame = 2
Query:   77 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-STVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNK 688
            IL +G TGY+GK++V+AS+  GHPT+  V      S  SK QLL  F++LGV I  G++  H+ LV   K+VD+VIST+      +Q+K+I AIKEAGN+KRF PSEFGN+VDRV  A+   ++  D K KIRRA EA GIP+T+V +     YF+  LL P   +   ++V I+G G+ K V N E+D+  YTIKA DDPR  N+
Sbjct:    8 ILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYGELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR-ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANR 209          
BLAST of FC920558 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45
Identity = 98/211 (46.45%), Postives = 136/211 (64.45%), Query Frame = 2
Query:   71 ASILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTVSGPSKSQLLDHFKNLGVKIVVGDVLNHESLVKAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHGAVEPTKSTYDVKAKIRRAVEAEGIPYTYVESYFFDGYFLPNLLQPGATAPPRDKVVIFGDGNPK-VYNKEDDIGTYTIKAVDDPRTLNKTFTF 700
            + IL  GGTGYIG  +V+ S+K GHPT+V  R ++    SK+ LLD F++LG  IV G++  HE LV+ +K+VDVVIS +    + DQ KI+ AIK AGN+KRF PS+FG + DR++ A+ P ++  + K  IRRA+E   IPYTYV +  F  YF+  LL+P     P+D++ ++G G  K   N E DIG YTIK   DPR LN+   +
Sbjct:    8 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS----SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIY 210          
The following BLAST results are available for this feature:
BLAST of FC920558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_SOLTU8.985e-8576.81Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_TOBAC2.076e-7366.51Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFRH_ARATH3.916e-7267.92Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_CICAR1.823e-6158.80Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_MEDSA9.048e-6157.41Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA6.484e-5956.94Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_MAIZE8.764e-5654.29Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_LUPAL2.470e-5049.53Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IGS1_PETHY1.074e-4548.54Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA4.080e-4546.45Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32009H10EF RVDevelop1 Citrus clementina cDNA clone C32009H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920558 ID=FC920558; Name=FC920558; organism=Citrus clementina; type=EST; length=707bp
GGGGAATAATAATAATAATAATAATCATAAACAAACTCTCCGGAATTGAA
CTGAACGAGTTTCAGAAATGGCATCGATTCTATCCATCGGCGGGACAGGG
TATATCGGTAAATTCATCGTGGAAGCAAGCGTGAAAGCCGGCCACCCGAC
GTTCGTGCTCGTGAGGGAATCCACAGTCTCAGGTCCTTCCAAATCTCAGC
TCCTCGACCACTTCAAAAACCTCGGCGTCAAAATCGTTGTCGGAGATGTT
TTGAATCACGAGAGTTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGAT
ATCGACAGTCGGTCACGCTTTATTAGCCGATCAGGTCAAGATTATTGCTG
CCATTAAAGAAGCCGGTAACGTTAAGAGATTCTTCCCATCGGAATTTGGA
AATGATGTTGATCGAGTCCATGGCGCCGTGGAGCCAACAAAATCGACGTA
TGACGTAAAGGCGAAAATCCGCCGAGCCGTTGAGGCAGAAGGCATTCCGT
ACACTTACGTAGAATCTTATTTTTTTGATGGCTACTTCCTCCCTAATTTG
TTGCAGCCTGGGGCCACTGCCCCCCCTAGGGATAAGGTTGTCATCTTCGG
CGATGGAAATCCAAAAGTTTATAACAAGGAAGATGATATTGGAACCTACA
CTATCAAAGCAGTTGATGATCCGAGAACCTTGAACAAAACCTTTACATTC
AGNCTCC
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