FC920559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP2_HUMAN (Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 3.690e-46 Identity = 89/230 (38.70%), Postives = 147/230 (63.91%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQP-VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQ 684 +A EEL +++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +ID+V+ HH FLD CL++C+L P+LLK +L S+C+ + Q Sbjct: 534 LAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQ 763
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP2_MOUSE (Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.402e-45 Identity = 90/234 (38.46%), Postives = 148/234 (63.25%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIK-----TSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQ 684 + EEL +++I + +L++LL++ALR + A DP +DL + L+ ++ + +E K T +D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +ID+V+ HH FLD CL++C+L P+LLK +L S+C+ + Q Sbjct: 534 LTEEELRKPVEDIILTRLEALLELALRMSTANTDPFKDDLKIELMPHDLITQLLRVLAIETKQEKAMTHADPTEL----TLSGLEAFSFDYMVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHISFLDNCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQ 763
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP2_PONAB (Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45 Identity = 88/230 (38.26%), Postives = 147/230 (63.91%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQP-VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFN-ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQ 684 +A EEL +++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+ ++ +Y+ FEV+EP WH++ L++A +ID+V+ +H FLD CL++C+L P+LLK +L S+C+ + Q Sbjct: 534 LAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELTLSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLPSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGYHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQ 763
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP2_DROME (Gamma-tubulin complex component 2 homolog OS=Drosophila melanogaster GN=Grip84 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38 Identity = 77/227 (33.92%), Postives = 136/227 (59.91%), Query Frame = 1 Query: 10 EELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRS-MLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL-HLPDLLKKVERLKSLCLQYAAATQ 684 +EL +D + L++LL + LR ++A DP +DL C + L+ +M+ +I + + + ++GLE F+ +Y+V+WP S+V++ +++KYQM+FR LF+CKHVERQLC W+ + AR F ++ R++ R M+ I +L +Y+ E++EPNWH+ +++T +++D V++ H FLD CL+ C+L L + + +L +CL+Y Q Sbjct: 526 DELTKNVDHVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMS-----KIMKKEENWQAQPRLDLSGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKENSIARQFEPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCMLTESSHLNRSIFKLCKICLKYCEFIQ 747
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: SPC97_DICDI (Spindle pole body component 97 OS=Dictyostelium discoideum GN=spc97 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.999e-35 Identity = 90/266 (33.83%), Postives = 142/266 (53.38%), Query Frame = 1 Query: 10 EELMPQLDEITVEKLQSLLDIALR-STAAAADPCHEDLTCSVERSSLLKRMATLKFVE---------------------IKTSSDGVDLEQPVSIT-----------------GLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARA-FNASG--TAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAAT 681 +EL LD+I + K+ SLL ++LR S+ + D +DL C L+ ++ + + TSS+ + V+ T G+E+ + +Y V WPLS++ISRK+L KYQ++FR LF CKHVE+ L W HQ R+ +N G T +S + LL M+ F+ +L +Y+ EVLEPNW+ M N ++T+K++D+VI+ H+ FL+ CL EC+L L+ + + SLC+ +A T Sbjct: 803 DELKKPLDQINMVKMNSLLQLSLRTSSISEEDEFKDDLECEFIPYKLVDQLLNIININNFNNPTTTTTTNTSSNNITATTNTSSNNTTINTTVNTTLIQSTSAHEVLKTNKLFGIESLAFNYNVGWPLSLIISRKSLIKYQIIFRHLFLCKHVEKVLVDTWSQHQFRRSSYNKPGLSTLLSFTHLLRHRMIHFLQNLEYYMMLEVLEPNWNKMKNSIKTSKTVDDVIRIHNDFLETCLTECMLTDTKLVNILMKFMSLCITFANFT 1068
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: ALP4_SCHPO (Spindle pole body component alp4 OS=Schizosaccharomyces pombe GN=alp4 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31 Identity = 91/269 (33.83%), Postives = 136/269 (50.56%), Query Frame = 1 Query: 4 AREELMPQLDEITVEKLQSLLDIALRS--TAAAADPCHEDLTCSVERSSL---LKRMATLKFVEIKTSSDGVDL--------------------------------EQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAF--NASGTAIS---RSSLLCRS-MLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAAT 681 A+ EL I++ KLQS LD+ALR T A DP E +T V ++SL L + ++ +E TSS G ++ I G ET L YKV +PLS+++SRKA+ +YQ++FR +HVE QL +W H A+ N+S I R+S L R+ ML F+ +++Y T EV+E +W L+ A+++D ++Q H FLD CL+EC+L LLK +L + C +A+ T Sbjct: 449 AQHELRKPAKYISITKLQSQLDLALRQPGTITATDPHKEYVTVEVNQTSLIDWLMHIVSISGLEEGTSSQGNEVWNESITKQADVGNETRNFESEHNRSTQGTSKVGSDKDINGFETMQLCYKVPFPLSLILSRKAIIRYQLLFRYFLLLRHVEMQLENSWVQHSKNSAWRLNSSNAKIEQWKRNSWLLRTRMLSFVQKIIYYTTSEVIETHWGKFMGELENARTVDNLMQEHIDFLDTCLKECMLTNSRLLKVQSKLLNTCAMFASYT 717
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP3_XENLA (Gamma-tubulin complex component 3 homolog OS=Xenopus laevis GN=tubgcp3 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 56/208 (26.92%), Postives = 97/208 (46.63%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 612 + + EL+ + L +L+ A+R+T A D +LKR+ ++ +E+ TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L W+ H + + + +L M+ FI+ + +Y+TFEVLE +W + N++ A+ +D +I HD FLD + CLL Sbjct: 579 LLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------NPEILKRL-DVRLLEVSPGD-----------TGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIWKGHMCNAKLLKGMPELSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVLKAQDLDHIIAAHDVFLDTIISRCLL 763
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP3_HUMAN (Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 55/208 (26.44%), Postives = 95/208 (45.67%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 612 + + EL+ + L +L+ A+R+T A D S + R ++ +E+ TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H R + + +L M+ FI+ + +Y+TFEVLE +W + N++Q A+ +D +I H+ FLD + CLL Sbjct: 580 LLKPELVRPATTLYQHNLTGILETAVRATNAQFD------------SPEILRRLDVRLLEVSPGD-----------TGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLL 764
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP3_MOUSE (Gamma-tubulin complex component 3 OS=Mus musculus GN=Tubgcp3 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 56/208 (26.92%), Postives = 96/208 (46.15%), Query Frame = 1 Query: 1 IAREELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLL 612 + + EL+ + L +L+ A+R+T A D +LKR+ ++ +E+ TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H R + + +L M+ FI+ + +Y+TFEVLE +W + NR+Q A+ +D +I H+ FL+ CLL Sbjct: 578 LLKPELVRPATTLYQHNLTGILETAVRATNAQFDS-----------PEILKRL-DVRLLEVSPGD-----------TGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDHIIAAHEAFLNTITSRCLL 762
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: SPC98_DICDI (Spindle pole body component 98 OS=Dictyostelium discoideum GN=spc98 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 58/237 (24.47%), Postives = 112/237 (47.26%), Query Frame = 1 Query: 10 EELMPQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARA---FNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRL-QTAKSIDEVIQ-HHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISSSI 705 E+L+ +I KL +D A+R++ A + +D+ ++ + L +R + G + FSL Y V PL+ ++S + +Y+ +F ++ K VE L W+ + + + + G I +S L+ M+ FI++ +YL FEVLE +W + + Q A +D++I+ HH + D C + L + + ++L S+ +++ LI+ SI Sbjct: 525 EDLLKPTSQIQRHKLVGWMDTAIRNSNAQFE--EQDIVNRLDIALLPERPGNI---------------------GWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRVEYSLASIWRKIRSSTSLSILSPIGGDIHKSHLIMNEMVHFISNFQYYLMFEVLECSWKNLEKFIDQEATDLDQLIEAHHQYLQDICNKMFLSNSDSCYECFKKLLSIIIKFTLLQTKLINLSI 738 The following BLAST results are available for this feature:
BLAST of FC920559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920559 ID=FC920559; Name=FC920559; organism=Citrus clementina; type=EST; length=707bpback to top |