FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.302e-52 Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 208 PEPKVKH--KEVSAVEDAESQQETEGNNKR-HLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 PE VK +E V ++S G K+ H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFETGF Sbjct: 176 PEESVKEVMEEKEEVRKSKSVSIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 327
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.698e-52 Identity = 95/123 (77.24%), Postives = 112/123 (91.06%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFETGF Sbjct: 201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 323
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 6.698e-52 Identity = 95/123 (77.24%), Postives = 112/123 (91.06%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H+NVVFIGHVDAGKST GGQI+FL+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFETGF Sbjct: 201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 323
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.492e-51 Identity = 94/123 (76.42%), Postives = 112/123 (91.06%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFETGF Sbjct: 72 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 194
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.492e-51 Identity = 94/123 (76.42%), Postives = 112/123 (91.06%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H+NVVFIGHVDAGKST GGQI++L+G VD RT++KYE+EAK+K+RE+WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GASQAD+ VLVISARKGEFETGF Sbjct: 72 KEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 194
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 190.274 bits (482), Expect = 7.664e-48 Identity = 92/154 (59.74%), Postives = 120/154 (77.92%), Query Frame = 1 Query: 193 SQPVHPEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 S PV + KV ++V V++ + G K H++++F+GHVDAGKST GG IL+L+G VD RT+ KYE+EAKD R+ WY++++MDTN+EER GKT+EVG+A+FETE R+TILDAPGHK YV MI GASQAD+G+LVISARKGE+ETGF Sbjct: 248 STPVTSD-KVIQEQVDEVDEEVVKDMFGG--KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVDKYEREAKDAGRQGWYLSWVMDTNKEERSDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGF 398
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.001e-47 Identity = 96/183 (52.46%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 196 QPVHPEPKVKHK-EVSAVEDAESQQETEGNN-----------------------------KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 +PV E K + K E+ VED + + T N K H++++F+GHVDAGKST GG +L+L+G VD RTI+KYE+EAKD R+ WY++++MDTN+EER GKT+EVG+A+FETE R+TILDAPGHK YV MI GASQAD+GVLVISARKGE+ETGF Sbjct: 198 KPVQTEEKTEEKSELPKVEDLKISESTHNTNNANVTSADALIKEQEEEVDDEVVNDMFGGKDHVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGF 380
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.230e-47 Identity = 92/161 (57.14%), Postives = 119/161 (73.91%), Query Frame = 1 Query: 217 KVKHKEVSAVEDAES------QQETEGNN---------KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K+K KE A +A +QE E + K H++++F+GHVDAGKST GG IL+++G VD RT++KYE+EAKD ++ WY++++MDTN EER GKT+EVGRA+FETE R+TILDAPGHK YV MI GASQAD+G+LVISARKGE+ETGF Sbjct: 197 KLKIKEEQAAANASGADSLIKEQEEEVDEGVVNDMFGGKDHMSIIFMGHVDAGKSTMGGNILYMTGSVDKRTVEKYEREAKDAGKQGWYLSWVMDTNREERDDGKTIEVGRAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGF 357
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.230e-47 Identity = 89/142 (62.68%), Postives = 114/142 (80.28%), Query Frame = 1 Query: 229 KEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 KE D E ++ G K H++++F+GHVDAGKST GG +L+L+G VD RT++KYE+EAK+ R+ WY++++MDTN+EER GKT+EVGRA+FETE R+TILDAPGHK YV MI GASQADIG+LVISARKGE+ETGF Sbjct: 254 KEQEDEVDEEVVKDMFGG-KDHVSIIFMGHVDAGKSTMGGNLLYLTGSVDKRTVEKYEREAKEAGRQGWYLSWVMDTNKEERNDGKTIEVGRAYFETEKRRYTILDAPGHKMYVSEMIGGASQADIGILVISARKGEYETGF 394
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.230e-47 Identity = 87/124 (70.16%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 +++ HLN+VF+GHVDAGKST G I+ L+GQVD T+ KYE+EAK+ RE W AYIMDTNEEER KGKTVEVGRAHFET R+TILDAPGH+ YVPNMI GA+QAD+G+LVIS++KGEFE G Sbjct: 113 DSREHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAG 236 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |