FC920587

Overview
NameFC920587
Unique NameFC920587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC920587 vs. ExPASy Swiss-Prot
Match: ARGE_DICDI (Acetylornithine deacetylase OS=Dictyostelium discoideum GN=argE PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 3 
Query:  129 LNKDAYVNLLSKLIGESRYVQNNPPELIPQEDRVVKHVLDALLPLSTKTGGGPLVINHV----TYFTGRGNIIVEYPGTEPG----KILSFVGMHMDVVTANPNEW 422
            L++  ++ LL KLIGE+  +QN PP LIP ED   +HV++AL P   K  GG L +  V      +  RGNII+EYPGT  G    K +SFVG H+DVV A+   W
Sbjct:   10 LDEKRFLTLLGKLIGETENLQNRPPALIPIEDNAGRHVIEALTPY-LKANGGVLELEQVHCDPVNYPKRGNIIIEYPGTSKGTSSPKTISFVGSHLDVVPADKTAW 114
The following BLAST results are available for this feature:
BLAST of FC920587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARGE_DICDI3.629e-1746.23Acetylornithine deacetylase OS=Dictyostelium disco... [more]
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Properties
Property NameValue
Genbank descriptionC32010D04EF RVDevelop1 Citrus clementina cDNA clone C32010D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920587 ID=FC920587; Name=FC920587; organism=Citrus clementina; type=EST; length=712bp
GAAGTAACTACTTATCCATACCACACCAAAACGAAAACCCCTCAAAACGC
GACACGACATTCGCAAGGCTTCCTCGCTTCTCGTGTTCGGCAATGGCTTC
TTCAGTGGTGAAGGAAACTCTGGGCACTCTTAACAAGGACGCCTATGTTA
ATCTTCTTTCAAAGCTAATTGGAGAGTCCAGATATGTGCAAAATAACCCA
CCTGAGTTGATCCCTCAGGAGGATAGGGTGGTCAAGCATGTATTGGATGC
TCTCCTTCCCTTGAGCACCAAAACTGGAGGAGGACCTTTGGTTATTAATC
ATGTCACATACTTTACGGGCAGAGGAAATATTATTGTGGAGTATCCTGGA
ACTGAGCCTGGAAAGATCTTGTCATTTGTTGGCATGCATATGGATGTTGT
CACCGCTAATCCTAATGAATGGGTTTGCTTGTCTTTCTTGATGCTTTTGT
TTGAATTGAATTGGGTTTATAAGTTCAGATTTTGGCACTATGATGGTTTT
ACTCTTATCTATATGTCTCATAAATGAATTCCTCTAGCATTTATCTTTTG
TGGGTTTGATCTGGATTAACTTAAAGTTGAAATTAAAATAATATGTCGTC
TGAAGTTACTCACAGTATGTTGCCAGACATGAATTTAGTTAGGAACATGG
GATTAGGATTTACCTTTTGTTGTACTATTTTGAATTGAANTTCTCTTCTG
CTGTGCTGATTC
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