FC920631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_TREDE (Seryl-tRNA synthetase OS=Treponema denticola GN=serS PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.433e-66 Identity = 125/241 (51.87%), Postives = 158/241 (65.56%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGL--GRYGEIS 714 PVG ED + K G F+F KDH QLG+ LD+ DF+A +VSG KFY+LKNEAV LE L + L+ + K GF P TP+I + ++ GF PRG + VYS+EG CL+ TAEI +GG H D I+ + LPLKY SHCF LYRVHQFSKLEMFV+C PEESD+ HEEL IEE++++ LG+ F+ VD T DLGAPAYRK+D+EAWMPG G +GE++ Sbjct: 111 PVGKEDSDNLEVKRCGTVPKFDFEPKDHVQLGQDLDLIDFEAGTKVSGVKFYFLKNEAVFLEQALTMYGLNILRKHGFKPFITPDIAKEEILYGIGFNPRGEESNVYSLEGEGTCLVATAEITLGGYHSDEIIKKESLPLKYCGLSHCFRREAGAAGQFSKGLYRVHQFSKLEMFVYCTPEESDALHEELRLIEEEIFNGLGIPFRVVDTCTGDLGAPAYRKWDLEAWMPGRNGGEWGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORDL (Seryl-tRNA synthetase OS=Borrelia duttonii (strain Ly) GN=serS PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.750e-62 Identity = 114/242 (47.11%), Postives = 163/242 (67.36%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGR---YGEIS 714 PVG ED +++ K GN F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ +IN+ S++ +GF TP++ R +V+ GF PRGA + +Y IE D+ L+GTAEI +GG + ++IL + PLK A SHCF LYRVHQFSK+EMF FC+ E+SD H E + +EE++++ L + ++ +++ + DLGAPAY+K+D+EAWMPG G YGE++ Sbjct: 111 PVGVSEDENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFSKLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNTIL-DLKSPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRIHNEFLELEEEIFTELEIPYRVLNVCSSDLGAPAYKKYDIEAWMPGRGENGDYGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORRA (Seryl-tRNA synthetase OS=Borrelia recurrentis (strain A1) GN=serS PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.949e-61 Identity = 114/242 (47.11%), Postives = 162/242 (66.94%), Query Frame = 1 Query: 1 PVG-GEDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGR---YGEIS 714 PVG ED +++ K GN F+F KDH ++G LD+FDF+ A EVSG+KFYYLKNEAV LE+ +IN+ S++ +GF TP++ R +V+ GF PRGA + +Y IE D+ L+GTAEI +GG + ++IL + PLK A SHCF LYRVHQFSK+EMF FC+ E+SD H E + +EE+++ L + ++ +++ + DLGAPAY+K+D+EAWMPG G YGE++ Sbjct: 111 PVGVSEDENVVLKVSGNIPKFDFKPKDHLEIGIHLDLFDFEKAREVSGNKFYYLKNEAVFLELAMINFAFSKLKAKGFDLFITPDVAREFIVDGIGFNPRGAESNIYKIEDTDKYLVGTAEITLGGYYYNTIL-DLKSPLKMAGLSHCFRKEAGAAGQFSKGLYRVHQFSKVEMFCFCRSEDSDRIHNEFLELEEEIFIELEIPYRVLNVCSSDLGAPAYKKYDIEAWMPGRGENGDYGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORGA (Seryl-tRNA synthetase OS=Borrelia garinii GN=serS PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.271e-60 Identity = 112/242 (46.28%), Postives = 163/242 (67.36%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMP---GLGRYGEIS 714 P+G E+ + K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + + I+ + LP+K A FSHCF LYRVHQFSK+EMF FC+ EES H+E + I+E +++ L + ++ +++ + DLG+PAY+K+D+EAWMP G G YGE++ Sbjct: 111 PIGNSEEDNFEIKKVGVVPKFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSLNKLREKGFDVFITPDVAREFIVDGIGFNPRGDESNIYKIESTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESQVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGSYGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_RUBXD (Seryl-tRNA synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=serS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.070e-59 Identity = 112/239 (46.86%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 1 PVGGEDCSIIR-KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 PVG +D + + G F F KDH +LG+AL I DFDA A+ +GSKFY+L+ EAV+LE+GL+ + L + RG+ TP++ R ++ GF PRG TQ+YS+E D LI TAEI + G +D I++E LP ++A SHCF LYRVHQF+K+EMF F PE+S HEE++ IEE+++ +L + ++ VD+ T DLGA AYRK+DVEAWMPG G YGE++ Sbjct: 111 PVGRDDSENVEIRRWGEAPEFGFEPKDHVELGEALGIIDFDAGAKTTGSKFYFLRGEAVLLELGLVRFALDLLAGRGYELAMTPDLARDRMLLGTGFVPRGPETQIYSVENTDLSLIATAEITLAGQLVDEIVAEESLPRRFAGLSHCFRTEAGAHGRASRGLYRVHQFTKVEMFAFTTPEQSGEMHEEMLSIEEEIFRTLEIPYRVVDICTGDLGAAAYRKYDVEAWMPGRGDYGEVT 349
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORAP (Seryl-tRNA synthetase OS=Borrelia afzelii (strain PKo) GN=serS PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.070e-59 Identity = 113/242 (46.69%), Postives = 163/242 (67.36%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMP---GLGRYGEIS 714 P+G E+ + K VG F+F KDH +LG+ LD+ DFD A EVSGSKFYYLKNEAV LE+ LIN++L+++ ++GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + + I+ + LP+K A FSHCF LYRVHQFSK+EMF FC+ EES H+E + I+E +++ L + ++ +++ + DLG+PAY+K+D+EAWMP G G YGEI+ Sbjct: 111 PIGNSEEDNFEIKKVGIIPRFDFKPKDHLELGRDLDLLDFDRAREVSGSKFYYLKNEAVFLEIALINFSLNKLREKGFNVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIKMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESSIIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEIT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_DICT6 (Seryl-tRNA synthetase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=serS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.933e-59 Identity = 106/227 (46.70%), Postives = 142/227 (62.56%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K GN F F KDH L D+ DF+ ++V+GS FYYLKNEAV+LE L + ++ GF TP++ R +++ GFQPRG Q+Y +E D LI TAEI +GG H D IL E LPLKY FSHCF LYRVHQFSK E+F+ C+PE+S+ HE ++ +EE ++ L + ++ VD+ + DLGAPA RKFD+EAWMPG G +GE++ Sbjct: 125 KRWGNIKTFTFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFALFRLVIDTLLPEGFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHEYILSLEEKIFQKLEIPYRVVDICSGDLGAPAARKFDIEAWMPGRGDFGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORBZ (Seryl-tRNA synthetase OS=Borrelia burgdorferi (strain ZS7) GN=serS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.933e-59 Identity = 110/242 (45.45%), Postives = 162/242 (66.94%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMP---GLGRYGEIS 714 P+G E+ + K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + + I+ + LP++ A FSHCF LYRVHQFSK+EMF FC+ EES H+E + I+E +++ L + ++ +++ + DLG+PAY+K+D+EAWMP G G YGE++ Sbjct: 111 PIGSSEEDNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLNKLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_BORBU (Seryl-tRNA synthetase OS=Borrelia burgdorferi GN=serS PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.933e-59 Identity = 110/242 (45.45%), Postives = 162/242 (66.94%), Query Frame = 1 Query: 1 PVGG-EDCSIIRKTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMP---GLGRYGEIS 714 P+G E+ + K VG F+F KDH +LG+ LD+ DFD A E+SGSKFYYLKNEAV LE+ LIN++L+++ +GF TP++ R +V+ GF PRG + +Y IE D+ L+GT+EI +GG + + I+ + LP++ A FSHCF LYRVHQFSK+EMF FC+ EES H+E + I+E +++ L + ++ +++ + DLG+PAY+K+D+EAWMP G G YGE++ Sbjct: 111 PIGSSEEDNFEIKRVGVVPQFDFKPKDHLELGRDLDLLDFDRAREISGSKFYYLKNEAVFLEIALINFSLNKLRDKGFDVFITPDVAREFIVDGIGFNPRGNESNIYKIEDTDKYLVGTSEITLGGYYYNKII-DLTLPIRMAGFSHCFRKEAGAYGQLSKGLYRVHQFSKVEMFCFCKAEESGVIHDEFLSIQEQIFTELEIPYRVLNICSFDLGSPAYKKYDIEAWMPGRDGKGGYGEVT 351
BLAST of FC920631 vs. ExPASy Swiss-Prot
Match: SYS_DICTD (Seryl-tRNA synthetase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=serS PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.183e-58 Identity = 105/227 (46.26%), Postives = 142/227 (62.56%), Query Frame = 1 Query: 34 KTVGNPSVFNFPVKDHFQLGKALDIFDFDAAAEVSGSKFYYLKNEAVMLEMGLINWTLSEVIKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIEGADQCLIGTAEIPVGGIHMDSILSESLLPLKYAAFSHCFXXXXXXXXXXXXXLYRVHQFSKLEMFVFCQPEESDSYHEELIRIEEDLYSSLGLHFKTVDMATEDLGAPAYRKFDVEAWMPGLGRYGEIS 714 K G FNF KDH L D+ DF+ ++V+GS FYYLKNEAV+LE L + ++ GF TP++ R +++ GFQPRG Q+Y +E D LI TAEI +GG H D IL E LPLKY FSHCF LYRVHQFSK E+F+ C+PE+S+ HE ++ +EE ++ L + ++ +D+ + DLGAPA RKFD+EAWMPG G +GE++ Sbjct: 125 KKWGEIKTFNFTPKDHLDLALLNDLVDFERGSKVTGSNFYYLKNEAVLLEFALFRLVIDTLLPEGFKLFITPDLARMEIIDGIGFQPRGPEAQIYRVEDTDLGLIATAEITLGGYHKDEILDELDLPLKYLGFSHCFRTEAGAYGRYNRGLYRVHQFSKAEIFIICRPEDSEEMHEYILGLEEKIFQKLEIPYRVLDICSGDLGAPAARKFDIEAWMPGRGEFGEVT 351 The following BLAST results are available for this feature:
BLAST of FC920631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920631 ID=FC920631; Name=FC920631; organism=Citrus clementina; type=EST; length=736bpback to top |