FC920635

Overview
NameFC920635
Unique NameFC920635
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length583
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15458 contig Ccv1_Contig15458:683..1265. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.392e-36
Identity = 97/199 (48.74%), Postives = 125/199 (62.81%), Query Frame = 1
Query:    4 QLQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGW---IHCWYCNFDK-WAKVMGSQRWRFSSSSFNGWRC--SSYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            ++ G+E GLFAIYDGHLGE VPAYLQ+HLFSNILKEE+F  DPQRSI  AYEKTDQAILSHSSDLG+G    +     N  + W   +G  R   S     G +    + D+ P +E  + E  G    +S +   +   + G          +SL +HLRSDPD++++ +    D+LVLA DGLWKVM+NQEA+DIAR
Sbjct:   58 KIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGRGGSTAVTAILMNGRRLWVANVGDSRAVLS----QGGQAIQMTIDHEPHTERLSIE--GKGGFVSNMPGDVP-RVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIAR 249          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.460e-35
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:    7 LQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSH 186
            ++GH  GL+AI+DGH G  V  YLQ HLF NIL + +FW +P+++I +AY+ TD  IL +
Sbjct:   12 VKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYILQN 71          

HSP 2 Score: 55.8398 bits (133), Expect = 2.460e-35
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 2
Query:  203 RGGSTAGTAILINGQRLWAANVGDSRAVL-STAGVAVHMTTDHDPNTERGSIEDK 364
            RGGSTA TAI+I+G+++  ANVGDSRA+L   + V   +T DH+P+ ER  ++ K
Sbjct:   76 RGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDKERDLVKSK 130          

HSP 3 Score: 45.0542 bits (105), Expect = 2.460e-35
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 3
Query:  354 LRIKRGFVSYMPGDVPRVNGQLAVSRAFGD 443
            ++ K GFVS  PG+VPRV+GQLA++RAFGD
Sbjct:  127 VKSKGGFVSQKPGNVPRVDGQLAMTRAFGD 156          

HSP 4 Score: 37.3502 bits (85), Expect = 2.460e-35
Identity = 18/41 (43.90%), Postives = 24/41 (58.54%), Query Frame = 1
Query:  451 LISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVD 573
            L  H+   P+I+   ++     L+LA DGLWKVMSN E  D
Sbjct:  159 LKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSNDEVWD 199          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35
Identity = 93/197 (47.21%), Postives = 124/197 (62.94%), Query Frame = 1
Query:    7 LQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGW---IHCWYCNFDK-WAKVMGSQRWRFSSSSFNGWRCSSYDYRP*SEH*TREH*G*SAA-LSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            +Q HE GLFAIYDGH+G++VPAYLQ+ LFSNILKE EFWVDP+RSI+KAYEKTDQAILS+SSDLG+G    +     N  K W   +G  R   S          S D+ P +E  + E  G   + L      ++ +L  S  F      + L +HL S+PDI+   +  + D+L+LA DG+WKVM+N+EA++IAR
Sbjct:   58 IQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGRGGSTAVTAILINGRKLWIANVGDSRAVLSHG--GAITQMSTDHEPRTERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAF----GDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIAR 248          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.262e-29
Identity = 87/202 (43.07%), Postives = 117/202 (57.92%), Query Frame = 1
Query:   10 QGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGW---IHCWYCNFDK-WAKVMGSQRWRFSSSSFNGWR--CSSYDYRP*SEH*TREH*G*SAA-----LSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            +G+E GLFAI+DGHLG+TVPAYLQ++LF+NIL EEEF   P R+I KAYEKTDQAILSH+ DLGQG    +     N  K W   +G  R    +    G R    S D+ P  E    E+ G   +     +  +C  +++               +L S L+S+PDI+   +    ++LVLA DGLWKVM+NQE VD+A+
Sbjct:   61 KGNELGLFAIFDGHLGDTVPAYLQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAILSHTPDLGQGGSTAVTAILLNGRKLWVANVGDSR----AVLLKGGRPIQMSTDHDPNVERSAIENRGGFVSNMPGDVPRVCGQLAVSR--------AFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAK 250          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 1.155e-23
Identity = 33/53 (62.26%), Postives = 36/53 (67.92%), Query Frame = 2
Query:  209 GSTAGTAILINGQRLWAANVGDSRAVLSTAGVAVHMTTDHDPN--TERGSIED 361
            GSTA  AILI G RL+ ANVGDSRAV   AG AV ++ DH PN   ER  IED
Sbjct:  215 GSTAVAAILI-GNRLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIED 266          

HSP 2 Score: 49.2914 bits (116), Expect = 1.155e-23
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 1
Query:    7 LQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAIL-SHSSD 195
            + G    LF ++DGH G     YL++HLF N++K  +F  D + +I++ + KTD   L S SSD
Sbjct:  146 VNGETVSLFGVFDGHGGPRAAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSD 209          

HSP 3 Score: 39.6614 bits (91), Expect = 1.155e-23
Identity = 16/41 (39.02%), Postives = 29/41 (70.73%), Query Frame = 1
Query:  460 HLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            +++++P+IQ  ++    + LVLA DGLW VM N++AV + +
Sbjct:  297 YVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLK 337          

HSP 4 Score: 28.1054 bits (61), Expect = 1.155e-23
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  393 DVPRVNGQLAVSRAFGDR 446
            D+ RV+G LAVSRAFG+R
Sbjct:  275 DIWRVDGILAVSRAFGNR 292          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23
Identity = 70/210 (33.33%), Postives = 101/210 (48.10%), Query Frame = 1
Query:   10 QGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGWIHCWYC----NFDKWAKVMGSQRWRFSSSSFNGWRCSSYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLET---------------ESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            + HE GLFAI+DGHLG++VP+YL+ +LF NILKE  FW +PQ +I  AY  T++ IL ++  LG G             D W   +G  R              + D+ P   H T E                +E  G +    P +                +SL +HL S+PD+++  +    + ++LA DGLWKVM NQEAVD+ +
Sbjct:   96 KSHELGLFAIFDGHLGDSVPSYLKANLFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAKQLGPGGSTAVTAIVVDGKDMWVANVGDSRAVVCER--GAANQLTVDHEP---HTTNER-------------QRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVK 287          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22
Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 1
Query:   16 HESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGW---IHCWYCNFDKWAKV----MGSQRWRFSSSSFNGWRCSSYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVD 573
            H+ GLFAI+DGHLG TVP +L+ HLF NILK+ EF  +PQ +I  AY+ TD  IL  +++LG+G    +     + +    +    +G  R   S S     +  S D+ P  E  + E  G     +L      ++  G           SL  HL S+PD+    +    D L+LA DGLWKVMSNQEAVD
Sbjct:   66 HDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGRGGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVA--KQLSVDHEPNKERHSIEKKG-GFVSNLPGDVPRVD--GQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVD 253          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 3.277e-22
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 2
Query:  209 GSTAGTAILINGQRLWAANVGDSRAVLSTAGVAVHMTTDHDPN--TERGSIED 361
            GSTA TAIL+ G  L+  NVGDSR V   AG AV ++ DH PN   E+  IED
Sbjct:  189 GSTAVTAILV-GNHLYVGNVGDSRVVALKAGKAVPLSEDHKPNRKDEQKRIED 240          

HSP 2 Score: 46.9802 bits (110), Expect = 3.277e-22
Identity = 22/55 (40.00%), Postives = 31/55 (56.36%), Query Frame = 1
Query:   28 LFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSS 192
            LF ++DGH G     YL+EHLF N++   E   D + +IS+ + KTD   L   S
Sbjct:  127 LFGVFDGHGGSLAAEYLKEHLFENLVNHPELLRDTKLAISQTFLKTDADFLESVS 181          

HSP 3 Score: 41.9726 bits (97), Expect = 3.277e-22
Identity = 17/45 (37.78%), Postives = 31/45 (68.89%), Query Frame = 1
Query:  448 SLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            +L  +++++PDIQ  ++    + L+LA DGLW VM N++AV + +
Sbjct:  267 ALKHYVKAEPDIQEKVVDESLEYLILATDGLWDVMRNEDAVSLLK 311          

HSP 4 Score: 28.1054 bits (61), Expect = 3.277e-22
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  393 DVPRVNGQLAVSRAFGDR 446
            D  RVNG LA+SRAFG+R
Sbjct:  249 DTWRVNGLLAMSRAFGNR 266          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22
Identity = 73/195 (37.44%), Postives = 99/195 (50.77%), Query Frame = 1
Query:    1 EQLQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGWIHCWYCNFDKWAKV----MGSQRWRFSSSSFNGWRCSSYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVD 573
            ++L+GHE GLFAI+DGHLG  V  YLQ +LF NILKE++FW D + +I  AY  TD  IL  S  LG+G             K+    +G  R   S +        S D+ P  E    E  G    +S I   +   + G          +SL  HL S+PDI +  +    + ++ A DG+WKV+SNQEAVD
Sbjct:   58 KKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKGGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVA--HQLSVDHEPSKEKKEIESRG--GFVSNIPGDVP-RVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVD 247          
BLAST of FC920635 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22
Identity = 74/196 (37.76%), Postives = 102/196 (52.04%), Query Frame = 1
Query:    1 EQLQGHESGLFAIYDGHLGETVPAYLQEHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGQGW-IHCWYCNFDKWAKVMGSQRWRFSSSSFNGWRCS-SYDYRP*SEH*TREH*G*SAALSLICQAMSLELMGSWQFLVPLETESLISHLRSDPDIQNTILYGRCDILVLARDGLWKVMSNQEAVDIAR 582
            +++ GH+ GLFAI+DGHLG  V  YLQ +LF NILKE++FW D + +I  AY  TD  IL  S  LG+G          D    V+ +     +  S NG     S D+ P  E    E  G    +S I   +   + G          +SL  HL SDPDI++  +    + ++ A DG+WKVMSNQEAVD+ +
Sbjct:   54 KKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGKGGSTAVTGILIDGKTLVIANVGDSRAVMSKNGVASQLSVDHEPSKEQKEIESRG--GFVSNIPGDVP-RVDGQLAVARAFGDKSLKIHLSSDPDIRDENIDHETEFILFASDGVWKVMSNQEAVDLIK 246          
The following BLAST results are available for this feature:
BLAST of FC920635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
P2C10_ARATH1.392e-3648.74Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C28_ARATH2.460e-3550.00Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C09_ARATH4.479e-3547.21Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C41_ORYSJ1.262e-2943.07Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C55_ORYSJ1.155e-2362.26Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C44_ORYSJ5.137e-2333.33Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C62_ORYSJ2.549e-2237.82Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C56_ORYSJ3.277e-2254.72Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C58_ARATH4.349e-2237.44Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C20_ARATH4.349e-2237.76Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC32011A10EF RVDevelop1 Citrus clementina cDNA clone C32011A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920635 ID=FC920635; Name=FC920635; organism=Citrus clementina; type=EST; length=583bp
GAGCAACTTCAAGGTCATGAATCCGGGTTGTTTGCTATTTATGACGGCCA
TTTGGGAGAAACTGTGCCTGCCTACCTACAAGAGCATTTGTTTTCCAACA
TCCTAAAGGAGGAAGAGTTTTGGGTTGACCCCCAGAGATCTATCTCCAAA
GCTTATGAGAAGACAGACCAAGCAATTCTCTCACACAGCTCTGACTTGGG
CCAGGGGTGGATCCACTGCTGGTACTGCAATTTTGATAAATGGGCAAAGG
TTATGGGCAGCCAACGTTGGAGATTCTCGAGCAGTTCTTTCAACGGCTGG
CGTTGCAGTTCATATGACTACAGACCATGATCCGAACACTGAACGAGGGA
GCATTGAGGATAAAGCGCGGCTTTGTCTCTTATATGCCAGGCGATGTCCC
TCGAGTTAATGGGCAGCTGGCAGTTTCTCGTGCCTTTGGAGACAGAGAGC
CTTATATCACATTTGCGATCAGATCCTGACATACAAAATACTATCTTATA
CGGCCGTTGTGACATCCTAGTCCTTGCAAGAGATGGTCTTTGGAAGGTGA
TGAGCAATCAAGAGGCTGTGGATATTGCAAGAA
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