FC920659

Overview
NameFC920659
Unique NameFC920659
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:33..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.361e-90
Identity = 159/196 (81.12%), Postives = 175/196 (89.29%), Query Frame = 1
Query:  103 WPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            WPKKDK+RLLHAVYRVGDLDRTIK YTECFGMKLLRKRDVPEEKY+NAFLGFGPE ++F +ELTYNYGV  YDIG GFGHFAIATEDVYKL E I++     +TREPGPVKGG+T IAF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMKLLR  D P+YKYT+AMLGYA+ED+TT +EL Y
Sbjct:   17 WPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTY 212          

HSP 2 Score: 125.946 bits (315), Expect = 1.934e-28
Identity = 64/126 (50.79%), Postives = 80/126 (63.49%), Query Frame = 1
Query:  127 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENI----RAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI 492
            L   + RVGDLDR+IKFY +  GMKLLRK+DVP+ KY+ A LG+  E    V+ELTYNYGVT Y  G  +   AI TEDVYK  E +    +  GG + R+PGP+ G  T IA   DPDG+   L+
Sbjct:  156 LCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLV 281          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.361e-90
Identity = 158/195 (81.03%), Postives = 177/195 (90.77%), Query Frame = 1
Query:  103 WPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            WPKKDKRR LH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGFGPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTREPGPVKGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR +++PEY  T+ M+GYAEE ++  LEL Y
Sbjct:   10 WPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTY 203          

HSP 2 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  127 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIR----AKGGNVTREPGPVKGGTTHIAFVKDPDGY 477
            L   + RVGDLDR +KF  +  GM+LLR+ + PE   +   +G+  E    V+ELTYNYGVT Y  G  +   AI T+DVYK  E ++      GG +TRE GP+ G  T I    DPDG+
Sbjct:  148 LCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGW 267          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.602e-41
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            R+LH + RVGDLD++IKFYTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+G T YD+GT FGH AI  +D+Y   + I+A GGNVTRE GPVKGGTTHIAFVKDPDGY+ ELIQ
Sbjct:    5 RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQ 128          

HSP 2 Score: 68.5514 bits (166), Expect = 3.665e-11
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            +   MLRVGDL +SIKFY + +GM+LLRT +  EY+YTLA +GY +E Q   +EL Y
Sbjct:    6 ILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTY 62          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.758e-40
Identity = 76/124 (61.29%), Postives = 94/124 (75.81%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            R+LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGPVKGGTTHIAFVKDPDGY+ ELIQ
Sbjct:    5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQ 128          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.062e-38
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            RLLH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +   +EL Y
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.062e-38
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            RLLH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +   +EL Y
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.062e-38
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            RLLH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +   +EL Y
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            RLLH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GPVKGG+T IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125          

HSP 2 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            L   MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +   +EL Y
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.593e-38
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 1
Query:  124 RLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            RLLH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GPVKGG+T IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125          

HSP 2 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 1
Query:  517 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTXLELNY 687
            L   MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +   +EL Y
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTY 59          
BLAST of FC920659 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.079e-37
Identity = 69/123 (56.10%), Postives = 91/123 (73.98%), Query Frame = 1
Query:  127 LLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 495
            LLH + RVGDLD++++FY +  GM LLRK+D P  +++ AF+G+G E  + V+ELT+N+G   YD+G GFGH A+  ED+Y   + IR KGG V REPGP+K GTT IAFV+DPDGY  ELIQ
Sbjct:    3 LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIELIQ 125          
The following BLAST results are available for this feature:
BLAST of FC920659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_ORYSJ1.361e-9081.12Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_BRAOG1.361e-9081.03Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_VIBPA2.602e-4162.90Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_VIBCH3.758e-4061.29Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_SHIFL2.062e-3860.48Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI2.062e-3860.48Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO572.062e-3860.48Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
LGUL_SALTY4.593e-3860.48Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI4.593e-3860.48Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_SYNY35.079e-3756.10Probable lactoylglutathione lyase OS=Synechocystis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32011D04EF RVDevelop1 Citrus clementina cDNA clone C32011D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920659 ID=FC920659; Name=FC920659; organism=Citrus clementina; type=EST; length=688bp
GGATCATATCTCACACTTGCGACCTCACTCCGACTTTCTGAGTGATTCCA
TATCAAAATGGCTGAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGG
AATGGCCAAAGAAAGATAAGCGACGCCTCCTTCATGCTGTGTATCGTGTT
GGTGATCTTGATCGCACCATCAAATTTTACACCGAATGCTTTGGGATGAA
GCTGTTGAGAAAGAGAGACGTCCCGGAAGAGAAATACTCAAATGCCTTTC
TTGGATTTGGCCCCGAACAGTCTCACTTTGTTGTGGAGTTAACGTACAAC
TATGGTGTAACTTCATATGATATTGGAACTGGTTTTGGCCATTTTGCAAT
TGCAACTGAAGATGTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTG
GCAATGTCACTAGAGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATT
GCCTTTGTGAAGGATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGG
TCCAACTCCTGAACCACTCTGTCAAGTAATGCTTCGCGTTGGCGATCTTG
GTCGCTCCATCAAGTTCTATGAAAAGGCTTTGGGGATGAAACTGTTAAGG
ACAGTTGATAAACCTGAATACAAGTACACCCTGGCCATGCTTGGATATGC
TGAGGAAGATCAGACTACTGNTCTGGAGTTAAACTATA
back to top