FC920661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 2.659e-107 Identity = 185/207 (89.37%), Postives = 193/207 (93.24%), Query Frame = 1 Query: 58 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 MP IPEEPLLA +PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS D RHWE LT E+HF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLE+YIKDSDEK+RLF A+ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 207
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 3.363e-102 Identity = 175/208 (84.13%), Postives = 192/208 (92.31%), Query Frame = 1 Query: 58 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 MPS+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE +L E+HF+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+TYIKD+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCD 208
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2B_ARATH (Putative ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.278e-101 Identity = 171/208 (82.21%), Postives = 194/208 (93.27%), Query Frame = 1 Query: 58 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 MPS+PEEP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE +LT DE+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSEMYSLLL+TYIKD+ E++ LF AIET+PCV KKA WA+ WI+GS++FAER++AFACVEGIFFSGSFC+IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCD 208
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 8.303e-93 Identity = 160/202 (79.21%), Postives = 179/202 (88.61%), Query Frame = 1 Query: 73 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 219
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 6.579e-90 Identity = 158/207 (76.33%), Postives = 178/207 (85.99%), Query Frame = 1 Query: 61 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 272
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_MESAU (Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus auratus GN=RRM2 PE=2 SV=1) HSP 1 Score: 328.946 bits (842), Expect = 1.466e-89 Identity = 157/213 (73.71%), Postives = 181/213 (84.98%), Query Frame = 1 Query: 43 SALTKMPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 S ++ PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 60 SKVSTNPSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 272
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_VACCA (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Ankara) GN=MVA032L PE=3 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.274e-89 Identity = 154/201 (76.62%), Postives = 173/201 (86.07%), Query Frame = 1 Query: 76 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 202
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus GN=Rrm2 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.274e-89 Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 1 Query: 61 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 272
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_VACCW (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Western Reserve) GN=VACWR043 PE=2 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 9.500e-89 Identity = 154/201 (76.62%), Postives = 173/201 (86.07%), Query Frame = 1 Query: 76 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 202
BLAST of FC920661 vs. ExPASy Swiss-Prot
Match: RIR2_VACCC (Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus (strain Copenhagen) GN=F4L PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 9.500e-89 Identity = 154/201 (76.62%), Postives = 173/201 (86.07%), Query Frame = 1 Query: 76 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGITFSNELISRDEGLHCD 678 EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ HVLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+EKN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRGLMPG+TFSNELISRDEGLHCD Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 202 The following BLAST results are available for this feature:
BLAST of FC920661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920661 ID=FC920661; Name=FC920661; organism=Citrus clementina; type=EST; length=679bpback to top |