FC920736

Overview
NameFC920736
Unique NameFC920736
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920736_ssr9 microsatellite FC920736_ssr9:9..28. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12758 contig Ccv1_Contig12758:136..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 85/138 (61.59%), Postives = 99/138 (71.74%), Query Frame = 3
Query:  282 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPS--SGPSFGF-AGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAA               KEPIIAG  ++ V  VE+K    +P+  +GPS G     K +EGP RC+TC+ RVGLTGFNCRCGNL+CA+HRY
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAA--SSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRY 138          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.047e-42
Identity = 85/138 (61.59%), Postives = 99/138 (71.74%), Query Frame = 3
Query:  282 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPS--SGPSFGF-AGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAA               KEPIIAG  ++ V  VE+K    +P+  +GPS G     K +EGP RC+TC+ RVGLTGFNCRCGNL+CA+HRY
Sbjct:    3 HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAA--SSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRY 138          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.730e-37
Identity = 81/140 (57.86%), Postives = 95/140 (67.86%), Query Frame = 3
Query:  282 HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIA--GIVDLQVGPVEIKKFSMEPS--SGPSFGFAGV-KAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            H E GCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ +EQA+LAA               KE I+A  G   + V  VE K   ++P+  +G S   A V K KEGP RC TC+ RVGLTGFNCRCGN++CA+HRY
Sbjct:    3 HKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAA--SSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRY 140          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.189e-32
Identity = 76/142 (53.52%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  282 HDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPSSGPSFGFAGVKAKE------GPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            HD+TGCQ+P EGP LC NNCGFFGSAATMNMCSKCHK M+  QEQ   A                KE   A +VD++   VE    S++PSS      A V A E      GP RCTTC  RVGLTGF CRCG+LFC  HRY
Sbjct:    3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQG--AKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQV--VAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRY 140          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21
Identity = 57/142 (40.14%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  285 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEI--------KKFSMEPSSGPSFGFAGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            +E  C+ PEG  LCVNNCGFFGS+ATMN+CS C+  + L Q+Q                      P+IA +++     +EI        KK    P+  PS         + P RCT C+ RVGLTGF CRCG  FC  HRY
Sbjct:    3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQ---------QASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPS-------PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRY 128          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 53/135 (39.26%), Postives = 69/135 (51.11%), Query Frame = 3
Query:  285 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAG-IVDLQVGPVEIKKFSMEPSSGPSFGFAGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            +E  CQ PE   LCVNNCGF GS+ATMN+CS C+  + L Q+Q   +                    I+  I+   +    +K    E  +  S        ++ P RCTTC+ RVGLTGF CRCG +FC VHRY
Sbjct:    3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRY 137          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 52/134 (38.81%), Postives = 67/134 (50.00%), Query Frame = 3
Query:  285 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPSSGPSFGFAGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            +ETG   PE PILCVNNCGFFGS  T NMCSKC++  +  +  A +                   P++  + D   G V   K  ME  +           K    RC +C+ +VGLTGF CRCG  FC++HRY
Sbjct:   11 EETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVV-------EKKPLASLSSTPLVTEVTDGGSGSVADGKQVMEEDT----------PKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRY 127          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 53/141 (37.59%), Postives = 68/141 (48.23%), Query Frame = 3
Query:  267 EKMESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVD-LQVGPVEIKKFSMEPSSGPSFGFAGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            E  ++  E     PE PILCVNNCGFFGS+ T NMCSKC++  +    +    A               K P+     D +    VE K+ + EP   PS             RC +C+ +VGLTGF CRCG  FC+ HRY
Sbjct:    4 ESWKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV----KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPS------------NRCLSCRKKVGLTGFQCRCGGTFCSTHRY 128          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 49/135 (36.30%), Postives = 65/135 (48.15%), Query Frame = 3
Query:  285 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMIL-NQEQAQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPSSGPSFGFAGVKAKEGPKRCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            DET C +  G  +CV  CGFFGS AT NMCS+C++     N    + AA               K+  ++ +V     PV +   S   +  P+      KA   P RC  C+ +VGLTGF CRCG  FC  HR+
Sbjct:   11 DETACGSGAGAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVGVAETTTKKARMSAVV-----PVAVASSSSAAAEQPA-----AKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRH 135          
BLAST of FC920736 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 49/144 (34.03%), Postives = 67/144 (46.53%), Query Frame = 3
Query:  276 ESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQ---AQLAAXXXXXXXXXXXXXXXKEPIIAGIVDLQVGPVEIKKFSMEPSSGPSFGFAGVKAKEGPK----RCTTCK*RVGLTGFNCRCGNLFCAVHRY 686
            E +D T   +P  P LCV  CGFFGS + MN+CSKC++ +   +EQ   A+ A                 + I  G++            S   SS    G +     + PK    RC +C  +VG+TGF CRCG+ FC  HRY
Sbjct:    4 EQNDSTSF-SPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLG-----------SGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRY 135          
The following BLAST results are available for this feature:
BLAST of FC920736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
SAP8_ORYSJ1.047e-4261.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.047e-4261.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ1.730e-3757.86Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH2.189e-3253.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH2.271e-2140.14Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH8.628e-2139.26Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ7.304e-2038.81Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ2.125e-1937.59Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ3.393e-1736.30Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH4.148e-1534.03Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32012D08EF RVDevelop1 Citrus clementina cDNA clone C32012D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920736 ID=FC920736; Name=FC920736; organism=Citrus clementina; type=EST; length=688bp
ACGCCCCGTCTCTCTCTCTCTCTCTCTCTGTCTCTTTTCTTTTTTATTTT
TGCTTGCCCTCACTTTTTTTTTTCTTTTTCAATATTATTACCTACGATTA
TCTCTTCGATTGAAGGCAAGCTTTCACGTCCATAAAACGACGTCGATTAG
TTTCAGTCTTGTCGGTTGATCAAAACCTTGATTTTTGAAACTGATTTTTG
GGGAATTTTTTTTTACAGATTAATTCGGTTCGATTTTGTAAATCAAGATC
GGACGAATAGGAGGTAGAAAAGATGGAATCACATGATGAAACTGGATGCC
AAGCTCCAGAAGGCCCCATTCTTTGCGTCAACAATTGTGGCTTCTTCGGA
AGTGCTGCTACCATGAATATGTGTTCCAAGTGCCACAAGGCCATGATCCT
TAATCAGGAACAGGCCCAACTAGCAGCTTCATCTATTGGGAGCATTGTGC
ATGGCAGCTCCGGTGGGACTGGCAAGGAGCCCATCATTGCTGGCATCGTG
GATCTACAAGTGGGACCAGTTGAGATAAAGAAATTCTCCATGGAACCATC
TAGTGGTCCTTCCTTTGGCTTCGCAGGAGTGAAAGCAAAGGAAGGCCCTA
AAAGGTGTACAACTTGCAAATAACGTGTCGGTTTGACAGGGTTCAATTGC
AGATGTGGGAACCTCTTCTGTGCAGTTCACCGATACTC
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