FC920746

Overview
NameFC920746
Unique NameFC920746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14189 contig Ccv1_Contig14189:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.325e-59
Identity = 120/211 (56.87%), Postives = 151/211 (71.56%), Query Frame = 2
Query:   59 MERSSSAVMAGLQPNSLICPFASSRNGCTLF-LPIPNSFSSAAGQSRHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            MERS  AV +G   N ++C   ++ +   L  L    +F S++ + RHC  P+S         + + V++     +  +VSS T   +  +LA+IDWD + FG  PTDYMY MKC RDG FS+G+LQ FGNI+++P++GVLNYGQGLFEGLKAYRKQDGNILLFRPEENA+RM+ GAERMCMPSP+VEQFVEAVK TVLANKRWIPP GKG
Sbjct:    1 MERS--AVASGFHRNYILCASRAATSTTRLHSLSSLRNFPSSSLRIRHCPSPIS---------SNFIVSEVSRNRRCDAVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKG 198          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57
Identity = 121/212 (57.08%), Postives = 146/212 (68.87%), Query Frame = 2
Query:   59 MERSSSAVMAGLQPNSLICPFASSRNGCTLFLPIPNSFSSAAGQS-RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDG-NILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            MER+  A++  +  N L+CP                +FS+    S R+  PP    ++ Q + +    N   S  +  +VSS++ S    +LADIDWD +GFG  P DYMYVMKC  DG FSKGELQRFGNIE+SPS+GVLNYGQGLFEGLKAYRK+DG NILLFRPEENA RM+ GAERMCMP+P+VEQFVEAV  TVLANKRW+PP GKG
Sbjct:    1 MERA--AILPSVNQNYLLCP--------------SRAFSTRLHSSTRNLSPPSFASIKLQHSSSSVSSNGGISLTRCNAVSSNSSSTLVTELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKG 196          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 85/119 (71.43%), Postives = 104/119 (87.39%), Query Frame = 2
Query:  332 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            AD+DWDNLGFG  P DYMYVMKC +DG F++GEL  +GNI+LSPS+GVLNYGQ ++EG KAYRK++G +LLFRP+ NA+RM++GAERM MPSPSV+QFV AVK T LANKRW+PP+GKG
Sbjct:   54 ADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 89/165 (53.94%), Postives = 113/165 (68.48%), Query Frame = 2
Query:  194 RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            R CLP  S      +    + ++ T +   +          E  + AD+DWDNLGF    TD+M+  K  RDGNF +G L R+GNIEL+P++G+LNYGQGL EG+KAYR +DG +LLFRPE NAMRM++GAERMCM SPSV QF+E VK TVLAN+RW+PP GKG
Sbjct:    4 RRCLPQYSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGKG 168          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 2
Query:  332 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            A++ WD LGF   PTDYMYV KC +  +FS GE+  +G+I +SP +G+LNYGQGLFEGLKAYR +DG I LFRP++NA+RMQ GA+R+CM  PS EQFVEAVK TVLAN +W+PP GKG
Sbjct:   22 ANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKG 140          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.325e-40
Identity = 74/128 (57.81%), Postives = 98/128 (76.56%), Query Frame = 2
Query:  305 TLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            T S    + A++ W+ LGF   P DYMYV KC +  +F++G++  +G+I +SP S +LNYGQGLFEGLKAYR +D  I +FRP++NA+RMQ GAER+CM  P++EQFVEAVK TVLANK+W+PP GKG
Sbjct:   10 TTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKG 137          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37
Identity = 67/119 (56.30%), Postives = 90/119 (75.63%), Query Frame = 2
Query:  332 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            A++ W+ L F F  TDYMYV KC    +F +G++  F +++L+P + VL YGQGL+EGLKAYR +DG ILLFRP++N +R+Q GA+R+ MP PSV+QFV A+K   LANK+WIPP GKG
Sbjct:   18 ANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKG 136          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 2
Query:  329 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            L ++DW NLGF +  TD+ ++    ++G++S+GEL     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F++A    + AN++W+ P   G
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSG 122          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  329 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            + D+DW+NLGF +  TDY ++    +DG + +G+L     + +   S  L+YGQ  FEGLKAYR +DG+I LFRP+ NA RMQ  A+R+ MP    E FV A K  V AN+ W+ P G G
Sbjct:    1 MKDLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSG 119          
BLAST of FC920746 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  329 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKG 688
            L ++DW NLGF +  TD+ ++    ++G++S+G L     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F+ A    V AN++W+ P   G
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSG 122          
The following BLAST results are available for this feature:
BLAST of FC920746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
BCAT5_ARATH6.325e-5956.87Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH2.035e-5757.08Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT2_ARATH7.749e-4971.43Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH1.119e-4753.94Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT7_ARATH1.084e-4264.71Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH1.325e-4057.81Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT4_ARATH5.210e-3756.30Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ2.270e-2445.83Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN5.058e-2445.83Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPY1.472e-2345.83Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionC32012E09EF RVDevelop1 Citrus clementina cDNA clone C32012E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920746 ID=FC920746; Name=FC920746; organism=Citrus clementina; type=EST; length=698bp
GGAAGGACTTTAACAATAAAGGTCAAATCAGGAACCCAGCTTCCACAGAG
AAGGAGATATGGAGAGAAGCAGCAGCGCAGTAATGGCTGGCCTTCAGCCG
AATAGCCTAATCTGTCCTTTCGCTTCTTCACGTAATGGTTGTACGCTCTT
CCTCCCCATTCCCAATTCCTTCTCCTCCGCCGCCGGACAAAGCCGTCATT
GCCTTCCTCCCTTATCTCTCAAGCTTCAAAAGCAAACTGCTTTCACTCCT
TACCATGTGAACCAAACGGACTCTCCTTTCAAGCTTTTTTCCGTTTCATC
TCATACTCTCAGCAATGAAACGATTCAATTAGCCGACATAGATTGGGACA
ACCTTGGATTTGGGTTTTGTCCTACTGATTATATGTACGTCATGAAATGT
GGAAGAGATGGAAACTTCTCTAAAGGTGAATTACAGCGTTTTGGTAACAT
TGAGTTGAGTCCATCCTCTGGAGTCTTAAATTATGGCCAGGGATTATTCG
AAGGCCTGAAAGCCTACAGGAAACAAGATGGTAACATTCTTCTCTTTCGT
CCTGAGGAAAATGCAATGCGGATGCAGGTGGGTGCGGAGCGGATGTGCAT
GCCATCACCATCAGTTGAACAGTTTGTGGAAGCTGTTAAGGCTACTGTTT
TAGCAAACAAACGTTGGATCCCTCCTTCTGGTAAAGGTCCTTATATAT
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