FC920772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQSRG Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRG 86
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.463e-20 Identity = 46/51 (90.20%), Postives = 51/51 (100.00%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQSRG Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRG 88
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.463e-20 Identity = 46/51 (90.20%), Postives = 51/51 (100.00%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQSRG Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRG 88
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20 Identity = 45/51 (88.24%), Postives = 51/51 (100.00%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQSRG Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRG 88
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.177e-18 Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQSRG Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSRG 86
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +IINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQSRG Sbjct: 36 KIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRG 86
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 ++I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQSRG Sbjct: 38 KVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSRG 88
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.909e-16 Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 ++I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQSRG Sbjct: 38 KVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSRG 88
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16 Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSR 604 +II DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQSR Sbjct: 36 KIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
BLAST of FC920772 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 2 Query: 455 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQSRG 607 +II DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQSRG Sbjct: 17 KIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSRG 67 The following BLAST results are available for this feature:
BLAST of FC920772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920772 ID=FC920772; Name=FC920772; organism=Citrus clementina; type=EST; length=608bpback to top |