FC920798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.500e-71 Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 3 Query: 246 MASGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKE 701 MASGGGYGD N KIDYVFKVVLIGDSAVGKSQILARFAR+EFSLDSK+TIGVEFQTRTLVI HK+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HADKNIVIILIG + DL QR VPTEDAKE A+KE Sbjct: 1 MASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKE 152
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71 Identity = 132/147 (89.80%), Postives = 143/147 (97.28%), Query Frame = 3 Query: 261 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKE 701 GYGD +QKIDYVFKVVLIGDSAVGKSQILARFAR+EFSLDSKATIGVEFQTRTL IQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD+NIVI+LIG ++DLE+QRAVPTEDAKE AQKE Sbjct: 4 GYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKE 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.723e-71 Identity = 131/147 (89.12%), Postives = 143/147 (97.28%), Query Frame = 3 Query: 261 GYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKE 701 GYGD +QKIDYVFKVVLIGDSAVGK+QILARFAR+EFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQ+FDHIPRWLEELR+HAD+NIVI+L G ++DLE+QRAVPTEDAKE AQKE Sbjct: 4 GYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKE 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 1.041e-64 Identity = 122/150 (81.33%), Postives = 136/150 (90.67%), Query Frame = 3 Query: 255 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 GG YG+ QKIDYVFKVVLIGDSAVGKSQ+LARFAR+EF+LDSKATIGVEFQTRTL I ++VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDI++RQSFDH+ RWLEELR HADKNIVI+LIG +SDL R VPTEDAKE A++E+ Sbjct: 5 GGSYGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAEREN 154
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52 Identity = 97/145 (66.90%), Postives = 122/145 (84.14%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 + + DY+FK+VLIGDS VGKS IL+RF R+EF L+SK+TIGVEF TRTL ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ G +SDL+ RAV ED + +A+KE S Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLS 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.724e-51 Identity = 95/146 (65.07%), Postives = 125/146 (85.62%), Query Frame = 3 Query: 273 PNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 P+++ DY+FKVVLIGDS VGKS +L+RF R+EF L+SK+TIGVEF TRTL ++ ++VKAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F+++ RWL+ELR HAD NIVI+LIG ++DL+ RAV TEDA+ A+KE S Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLS 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 201.445 bits (511), Expect = 3.841e-51 Identity = 95/145 (65.52%), Postives = 121/145 (83.45%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 +Q+ DY+FK+VLIGDS VGKS IL+RF R+EF L+SK+TIGVEF TRT ++ K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ G +SDL R+V ED + +A+KE S Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLS 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.118e-50 Identity = 95/145 (65.52%), Postives = 120/145 (82.76%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 + + DY+FK+VLIGDS VGKS IL+RF R+EF L+SK+TIGVEF TRTL ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++RQ+FD++ RWL ELR HAD NIVI++ G +SDL RAV +D +++KE S Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLS 150
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 199.519 bits (506), Expect = 1.460e-50 Identity = 92/148 (62.16%), Postives = 124/148 (83.78%), Query Frame = 3 Query: 267 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 G + + DY+FKVVLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+G +SDL RAVPT++A+ A+K + S Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLS 149
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 1.460e-50 Identity = 92/148 (62.16%), Postives = 124/148 (83.78%), Query Frame = 3 Query: 267 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 G + + DY+FKVVLIGDS VGKS +L+RF R+EF+L+SK+TIGVEF TR++ + K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++ +++++ RWL+ELR HAD NIVI+L+G +SDL RAVPT++A+ A+K + S Sbjct: 2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLS 149 The following BLAST results are available for this feature:
BLAST of FC920798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920798 ID=FC920798; Name=FC920798; organism=Citrus clementina; type=EST; length=712bpback to top |