FC920825

Overview
NameFC920825
Unique NameFC920825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:46..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.731e-90
Identity = 158/197 (80.20%), Postives = 177/197 (89.85%), Query Frame = 3
Query:   90 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEXNLYY 680
            WPKKDKRRFLH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGFGPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTREPGPVKGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R++KF EKALGM+LLR +++PEY  T+ M+GYAEE ++ VLE    Y
Sbjct:   10 WPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNY 205          

HSP 2 Score: 98.5969 bits (244), Expect = 3.222e-20
Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  132 RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIR----AKGGNVTREPGPVKGGTTHIAFVKDPDGY 464
            RVGDLDR +KF  +  GM+LLR+ + PE   +   +G+  E    V+ELTYNYGVT Y  G  +   AI T+DVYK  E ++      GG +TRE GP+ G  T I    DPDG+
Sbjct:  154 RVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGW 267          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 2.500e-89
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 3
Query:   90 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAK-GGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEXNLYY 680
            WPKKDK+R LHAVYRVGDLDRTIK YTECFGMKLLRKRDVPEEKY+NAFLGFGPE ++F +ELTYNYGV  YDIG GFGHFAIATEDVYKL E I++     +TREPGPVKGG+T IAF +DPDGY+FELIQRGPTPEPLCQVMLR GDL RSIKFYEKALGMKLLR  D P+YKYT+AMLGYA+ED+TTV+E    Y
Sbjct:   17 WPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNY 214          

HSP 2 Score: 124.79 bits (312), Expect = 4.198e-28
Identity = 63/120 (52.50%), Postives = 78/120 (65.00%), Query Frame = 3
Query:  132 RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENI----RAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELI 479
            RVGDLDR+IKFY +  GMKLLRK+DVP+ KY+ A LG+  E    V+ELTYNYGVT Y  G  +   AI TEDVYK  E +    +  GG + R+PGP+ G  T IA   DPDG+   L+
Sbjct:  162 RVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLV 281          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 78/124 (62.90%), Postives = 95/124 (76.61%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDLD++IKFYTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+G T YD+GT FGH AI  +D+Y   + I+A GGNVTRE GPVKGGTTHIAFVKDPDGY+ ELIQ
Sbjct:    5 RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQ 128          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 6.244e-40
Identity = 76/124 (61.29%), Postives = 93/124 (75.00%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGPVKGGTTHIAFVKDPDGY+ ELIQ
Sbjct:    5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQ 128          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38
Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 68.9366 bits (167), Expect = 2.734e-11
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 3
Query:  504 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE 665
            L   MLR GDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+E
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIE 56          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38
Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 68.9366 bits (167), Expect = 2.734e-11
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 3
Query:  504 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE 665
            L   MLR GDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+E
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIE 56          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38
Identity = 74/124 (59.68%), Postives = 92/124 (74.19%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GPVKGGTT IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125          

HSP 2 Score: 68.9366 bits (167), Expect = 2.734e-11
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 3
Query:  504 LCQVMLRAGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE 665
            L   MLR GDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+E
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIE 56          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.302e-37
Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GPVKGG+T IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.302e-37
Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 3
Query:  111 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GPVKGG+T IAFV+DPDGY  ELI+
Sbjct:    2 RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIE 125          
BLAST of FC920825 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36
Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 3
Query:  117 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 482
            LH + RVGDLD++++FY +  GM LLRK+D P  +++ AF+G+G E  + V+ELT+N+G   YD+G GFGH A+  ED+Y   + IR KGG V REPGP+K GTT IAFV+DPDGY  ELIQ
Sbjct:    4 LHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIELIQ 125          
The following BLAST results are available for this feature:
BLAST of FC920825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_BRAOG1.731e-9080.20Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_ORYSJ2.500e-8979.29Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_VIBPA4.324e-4162.90Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_VIBCH6.244e-4061.29Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_SHIFL5.844e-3859.68Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI5.844e-3859.68Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO575.844e-3859.68Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
LGUL_SALTY1.302e-3759.68Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.302e-3759.68Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_SYNY31.439e-3655.74Probable lactoylglutathione lyase OS=Synechocystis... [more]

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Properties
Property NameValue
Genbank descriptionC32013E05EF RVDevelop1 Citrus clementina cDNA clone C32013E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920825 ID=FC920825; Name=FC920825; organism=Citrus clementina; type=EST; length=680bp
GACTTGCGACTTCACTCCGACTCTCTGAGTGATTCCATATCAAAATGGCT
GAGGCTTCTCCTGCTGCTGCTAATGCCGAGTTGCTGGAATGGCCAAAGAA
AGATAAGCGACGCTTCCTTCATGCTGTGTATCGTGTTGGTGATCTTGATC
GCACCATCAAATTTTACACTGAATGCTTTGGGATGAAGCTGTTGAGAAAG
AGAGACGTCCCAGAAGAGAAATACTCAAATGCCTTTCTTGGATTTGGCCC
CGAACAGTCTCACTTTGTTGTGGAGTTAACATACAACTATGGTGTAACTT
CATATGATATTGGAACTGGTTTTGGCCATTTTGCAATTGCAACTGAAGAT
GTTTACAAACTGGTTGAAAACATTCGTGCCAAGGGTGGCAATGTCACTAG
AGAGCCTGGTCCAGTTAAAGGTGGAACAACTCACATTGCCTTTGTGAAGG
ATCCCGATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAACTCCTGAA
CCACTCTGTCAAGTAATGCTTCGCGCTGGCGATCTTGGTCGCTCCATCAA
GTTCTATGAAAAGGCTTTGGGGATGAAACTGTTAAGGACAGTTGATAAAC
CTGAATACAAGTACACCCTGGCCATGCTTGGATATGCTGAGGAAGATCAG
ACTACTGTTCTGGAGNTAAACTTATATTAT
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