FC920838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920838 vs. ExPASy Swiss-Prot
Match: FBW2_ARATH (F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.573e-64 Identity = 75/115 (65.22%), Postives = 91/115 (79.13%), Query Frame = 2 Query: 350 KTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLD*XG 694 KTL++PRS +++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+ G Sbjct: 109 KTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRG 223 HSP 2 Score: 116.316 bits (290), Expect = 3.573e-64 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 3 Query: 129 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRC-QPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAE 350 EVLTV+P VCK+W RAV GPYCWQEIDIE WSNR Q DHLDRM+EMLI RS+GSLRKL V+GL ND +FS IA+ Sbjct: 29 EVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQ 103
BLAST of FC920838 vs. ExPASy Swiss-Prot
Match: SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 9.521e-12 Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 2 Query: 350 KTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLD 685 ++LRL R S+++D + +L + L+LSYCS +L +G+ C + L N HP + DD+A AIA TMPKL+ L++ + +S + IL +C+ LE LD Sbjct: 118 RSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLD 223 HSP 2 Score: 35.4242 bits (80), Expect = 9.521e-12 Identity = 19/56 (33.93%), Postives = 28/56 (50.00%), Query Frame = 3 Query: 129 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSL 293 E+L VC+SWRR P W++ID+ + D+ L+ M + RS G L Sbjct: 38 EILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGL 93
BLAST of FC920838 vs. ExPASy Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 5.839e-11 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 2 Query: 350 KTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLD 685 K+L L R ++D VA+ ++ + +L++SYC G +L IG+ C L L N P DD A AIA +MP+L+ L++ + ++ + + IL C LE LD Sbjct: 280 KSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLD 391 HSP 2 Score: 35.4242 bits (80), Expect = 5.839e-11 Identity = 21/83 (25.30%), Postives = 40/83 (48.19%), Query Frame = 3 Query: 129 EVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAEKHCDFQEV 374 E+L VCK W R P W++IDI+ ++R + L+ M + RS G L ++ + + + IA++ + + + Sbjct: 200 EILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSL 282 The following BLAST results are available for this feature:
BLAST of FC920838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920838 ID=FC920838; Name=FC920838; organism=Citrus clementina; type=EST; length=703bpback to top |