FC920889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920889 vs. ExPASy Swiss-Prot
Match: SNAG_ARATH (Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana GN=GSNAP PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.066e-62 Identity = 117/171 (68.42%), Postives = 136/171 (79.53%), Query Frame = 3 Query: 48 SSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPCDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAATF 560 SSDP K+M KADK+TKL+LTRWSADW+ AT+LYEQAANGFR + E+AK+A EKAS+GQEM +SP DAAKHMESAAALA++L W EVADFYRKASELY ECGR+QP P+DAIQLYTDAC +LEED ++QMAFD+YRA NVYIKLEK+ DAATF Sbjct: 2 SSDPDKMMSKADKMTKLTLTRWSADWRGATELYEQAANGFRASNKYEKAKVALEKASKGQEMQASPWDAAKHMESAAALAQKLSIWNEVADFYRKASELYVECGRAQPASDALGKAARALEDVKPDDAIQLYTDACEILEEDGRDQMAFDLYRACANVYIKLEKFTDAATF 172
BLAST of FC920889 vs. ExPASy Swiss-Prot
Match: SNAG_DICDI (Gamma-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpC PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.978e-21 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 69 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPCDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAATFL 563 M + DKL+K ++ RW ADW SA YE+AAN FR AK + AK F + S Q + AAK ME+A+A+AKEL +E A+ ++ +LY G S I+L TDAC + E DDK+ + D ++ ++ +K +KY +A + Sbjct: 17 MKEGDKLSKTNIFRWKADWDSAALAYEKAANAFRSAKIYDSAKYCFLRLSLCQTHMDVYYLAAKSMENASAMAKELKETQECANLLLESCKLYRTNGNSFQAADTMTKAAKLLEDIDLNQTIKLLTDACELFELDDKDHFSGDTFKQTISMLLKHKKYTEAVDLM 181
BLAST of FC920889 vs. ExPASy Swiss-Prot
Match: SNAG_BOVIN (Gamma-soluble NSF attachment protein OS=Bos taurus GN=NAPG PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 46/162 (28.40%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 69 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPCDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 554 + KA+K K +W D+ SA Y +AA F+ AK EQAK A K + E + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 13 LAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLKEAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174
BLAST of FC920889 vs. ExPASy Swiss-Prot
Match: SNAG_MOUSE (Gamma-soluble NSF attachment protein OS=Mus musculus GN=Napg PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 45/162 (27.78%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 69 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPCDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 554 + KA+K K +W D+ SA Y +AA F+ AK EQAK A + + E + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 13 LAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174
BLAST of FC920889 vs. ExPASy Swiss-Prot
Match: SNAG_HUMAN (Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 45/162 (27.78%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 69 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPCDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDVYRAATNVYIKLEKYADAA 554 + KA+K K +W D+ SA Y +AA F+ AK EQAK A + + E + AAK E A + KE+ E KAS +Y E G PE A+QLY + E +++ + A ++ A+ + ++ ++ +AA Sbjct: 13 LAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAA 174 The following BLAST results are available for this feature:
BLAST of FC920889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920889 ID=FC920889; Name=FC920889; organism=Citrus clementina; type=EST; length=563bpback to top |