FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14212 contig Ccv1_Contig14212:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 3.694e-93
Identity = 170/188 (90.43%), Postives = 177/188 (94.15%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSDPSVQSD++ WPFKV+ GPGDKPMIVVTYKGEEK+F+ EEISSMVLTKMKEIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.458e-91
Identity = 167/188 (88.83%), Postives = 174/188 (92.55%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGRRFSD SVQ DM+ WPFKV+ GPGDKPMIVVTYKGEEK F+ EEISSMVLTKMKEIAEA+LG  VKNAVVTVPAYFNDSQRQATKDAG I+GLNVMRIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAKRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 7.703e-91
Identity = 166/186 (89.25%), Postives = 174/186 (93.55%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A  EGKAIGIDLGTTYSCVGVWQNDRVEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSD SVQ+DM+ WPFKV   P DKPMIVV YKGEEK+FS EEISSMVL KM+E+AEA+LGHAVKNAVVTVPAYFNDSQRQATKDAGAI+GLNV+RIINEPTAAAIAYG
Sbjct:    2 ATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYG 187          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.112e-89
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDM+ WPFKV+ GPGDKPMIVV YKGEEK+FS EEISSMVL KMKEIAEA+LG  VKNAVVTVPAY NDSQRQATKDAG I+GLNVMRIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 328.176 bits (840), Expect = 2.478e-89
Identity = 167/188 (88.83%), Postives = 175/188 (93.09%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYS VGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQ+DM+H PFKVVSGPG+KPMI V YKGEEK+F+ EEISSMVLTKMKEIAEAYLG  VKNAVVTVPAYFNDSQRQATKDAG I+GLNVMRIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 326.25 bits (835), Expect = 9.416e-89
Identity = 163/188 (86.70%), Postives = 172/188 (91.49%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            M+ K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDM+ WPFK+ +GP DKPMI V YKGEEK F+ EEISSMVL KM+EIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYG
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.971e-88
Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF+D SVQSD++ WPF + SGP +KPMIVV YKGE+K FS EEISSM+L KM+EIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 3.029e-87
Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA K EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSD + WPF ++SG  +KPMIVV YKGEEK+F+ EEISSMVL KM+EIAEA+LG  VKNAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 1.662e-85
Identity = 161/186 (86.56%), Postives = 169/186 (90.86%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AK EG AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFS P+VQS M+ WP + + G GDKPMIV  YKGEEK+F+ EEISSMVL KMKEIAEAYLG  +KNAVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYG
Sbjct:    2 AKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.662e-85
Identity = 151/183 (82.51%), Postives = 167/183 (91.26%), Query Frame = 3
Query:  129 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            +G ++GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP+ Q+D++HWPFKV  G GDKP I V +KGE K F PEEISSMVL KMKE+AEA++G AV NAV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPT AAIAYG
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDPATQADIKHWPFKVTPGAGDKPQITVEFKGETKTFQPEEISSMVLIKMKEVAEAFIGTAVNNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTRAAIAYG 187          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY3.694e-9390.43Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_SOLLC3.458e-9188.83Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_SOYBN7.703e-9189.25Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP72_SOLLC1.112e-8988.30Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL2.478e-8988.83Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP71_ARATH9.416e-8986.70Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP73_ARATH7.971e-8885.64Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH3.029e-8785.64Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP70_MAIZE1.662e-8586.56Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_ACHKL1.662e-8582.51Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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