FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT6_ARATH (Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 5.404e-108
Identity = 185/227 (81.50%), Postives = 205/227 (90.31%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAIIT TFSIIKQCSALGCFP+VKI+HTSSKIHGQIYIPEINW LM+LCLA+T+GFRDTK +GNASGLAVITVMLVTTCLMSLVIVLCWH+S           G++E+LYFSASLIKFLEGAWVPIAL+F FL+AM  WHYGTLK+YE+DVQNKVS+NW+LSL   LGI RVRG+GLIHTELVSG+PAIFSHFVTNLPAFHQV+VFLC+KSVPVPHVRP ERFLV
Sbjct:  359 GSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWILMVLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSASLIKFLEGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVRGLGLIHTELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLV 585          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.218e-108
Identity = 182/227 (80.18%), Postives = 204/227 (89.87%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+IT TFS+IKQC+ALGCFPRVKI+HTS K+HGQIYIPEINW LM+LCLAIT+GFRDTKH+GNASGLAVITVMLVTTCLMSLVIVLCWH+S           G++EALYFSASLIKF EGAWVPI L+FIF+  M +WHYGT+KKYEFD+QNKVSINW+L L PNLGIVRVRGIGLIHTEL SGIPAIFSHFVTNLPAFHQV++FLCIK+VP+PHV P+ERFLV
Sbjct:  389 GSQAVITGTFSMIKQCTALGCFPRVKIVHTSDKVHGQIYIPEINWILMILCLAITIGFRDTKHLGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAFGFIIFFGTIEALYFSASLIKFREGAWVPIVLAFIFMAIMCIWHYGTIKKYEFDLQNKVSINWLLGLSPNLGIVRVRGIGLIHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIKNVPIPHVSPEERFLV 615          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 387.111 bits (993), Expect = 4.575e-107
Identity = 186/229 (81.22%), Postives = 208/229 (90.83%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSL--GPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAIIT TFSIIKQC++LGCFP+VKI+HTSS++HGQIYIPEINWTLMLLCLA+TVGFRDTKH+ NASGLAVITVMLVTTCLMSLVIVLCW +S           G++E LYFSASLIKFLEGAWVP+ALSFIFL+ MYVWHYGTLK+YEFDVQNKVSINW+L+L    NLGIVRV GIG+I+TELVSGIPAIFSHF+TNLPAFHQVVVFLC+KSVPVPHV+P+ERFLV
Sbjct:  359 GSQAIITGTFSIIKQCTSLGCFPKVKIVHTSSRMHGQIYIPEINWTLMLLCLAVTVGFRDTKHISNASGLAVITVMLVTTCLMSLVIVLCWRKSSLYALAFIFFFGTIEVLYFSASLIKFLEGAWVPVALSFIFLLIMYVWHYGTLKRYEFDVQNKVSINWLLTLFGSSNLGIVRVHGIGVINTELVSGIPAIFSHFITNLPAFHQVVVFLCVKSVPVPHVKPEERFLV 587          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.282e-105
Identity = 178/227 (78.41%), Postives = 203/227 (89.43%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+IT TFSIIKQCS+L CFP VKI+HTSS +HGQIYIPEINW LM+LCLA+T+GFR+TKH+ NA GLAVITVMLVTTCLMSLVIVLCW++S           G++E LYFSASL+KF EGAWVPI LSFIF++ M VWHYGT+KKYEFD QNKVS+NW+L+LGP+LGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQV+VFLC+KSVPVPHV+P+ERFLV
Sbjct:  358 GSQAVITGTFSIIKQCSSLSCFPGVKIVHTSSTVHGQIYIPEINWILMILCLAVTLGFRNTKHLANAQGLAVITVMLVTTCLMSLVIVLCWNKSIFLALGFLIFFGTIEVLYFSASLVKFHEGAWVPITLSFIFMIVMCVWHYGTIKKYEFDFQNKVSVNWLLNLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVQPEERFLV 584          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.069e-103
Identity = 175/227 (77.09%), Postives = 203/227 (89.43%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAIIT TFSIIKQCS+L CFPRVKI+HTSS +HGQIYIPEINW LM+LCL++T+GFRDTKH+ NA GLAVITVMLVTTCLMSLVI+LCW++S           G++E +YF+ASL+KF EGAWVP+ LSFIF++ M VWHYGT KKYEFDVQNKVSI+W+L++GP+LGIVRVRGIGLIHTEL+SGIPAIFSHFVTNLPAFHQV+VFLCIKSV VPHV+P+ERFLV
Sbjct:  356 GSQAIITGTFSIIKQCSSLNCFPRVKIVHTSSTVHGQIYIPEINWILMILCLSVTIGFRDTKHLTNAQGLAVITVMLVTTCLMSLVILLCWNKSIVYALSFLLFFGAIEVIYFAASLVKFHEGAWVPVTLSFIFMMVMCVWHYGTKKKYEFDVQNKVSISWLLNIGPSLGIVRVRGIGLIHTELMSGIPAIFSHFVTNLPAFHQVLVFLCIKSVSVPHVQPEERFLV 582          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT2_ARATH (Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 2.879e-93
Identity = 160/227 (70.48%), Postives = 189/227 (83.26%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAII+ TFSII Q  +LGCFPRVK+IHTS K+HGQIYIPEINW LM+LC+A+T+GFRD KH+GNASGLAV+ VMLVTTCL SLVIVLCWH+            GS+E LYFSASL KF EGAW+PI LS IF++ M+VWHY T+KKYEFD+QNKVS+ W+L+LGP+LGI RV GIGL+ T+L SGIPA FS FVTNLPAFH+V+VF+C+KSVPVP V P ER+LV
Sbjct:  355 GSQAIISGTFSIINQSQSLGCFPRVKVIHTSDKMHGQIYIPEINWMLMILCIAVTIGFRDVKHLGNASGLAVMAVMLVTTCLTSLVIVLCWHKPPILALAFLLFFGSIELLYFSASLTKFREGAWLPILLSLIFMIIMFVWHYTTIKKYEFDLQNKVSLEWLLALGPSLGISRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRVLVFVCVKSVPVPFVPPAERYLV 581          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK9_ORYSJ (Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.094e-92
Identity = 157/227 (69.16%), Postives = 189/227 (83.26%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAII+ TFSII Q  +L CFPRVK++HTS  IHGQIYIPEINW LM+LC+A+TVGFRDTKHMGNASGLAVITVMLVTTCL SLVI+LCWH+S           GS+E LYFSASLIKF EGAW+PI L+ I +  M++WH+ T+KKYEFD+ NKV++ W+L+LG  LG+VRV GIGL++T+L SG+PA FS FVTNLPAFH+V+VF+C+KSVPVPHV P ER+LV
Sbjct:  355 GSQAIISGTFSIINQSQSLSCFPRVKVVHTSENIHGQIYIPEINWLLMVLCIAVTVGFRDTKHMGNASGLAVITVMLVTTCLTSLVIMLCWHRSPALALVFFLFFGSIEVLYFSASLIKFREGAWLPIMLALILMAVMFIWHHTTIKKYEFDLHNKVTLEWLLALGDKLGMVRVPGIGLVYTDLTSGVPANFSRFVTNLPAFHRVLVFVCVKSVPVPHVLPAERYLV 581          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK8_ORYSJ (Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 1.866e-92
Identity = 159/227 (70.04%), Postives = 188/227 (82.82%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAII+ TFSII Q  +L CFPRVK++HTS KIHGQIYIPEINW LM+LC+A+TVGFRDTKHMGNASGLAVITVMLVTTCL SLVI+LCW +            GSVEALYFSASLIKFLEGAW+PI L+   +  M VWHY T+KKYEFD+ NKV++ W+L+LG  LG+VRV GIGL++T+L SG+PA FS FVTNLPAFHQV+VF+C+KSVPVP+V P ER+L+
Sbjct:  355 GSQAIISGTFSIINQSQSLSCFPRVKVVHTSDKIHGQIYIPEINWLLMILCIAVTVGFRDTKHMGNASGLAVITVMLVTTCLTSLVIMLCWRRPPVLALCFLLFFGSVEALYFSASLIKFLEGAWLPILLALFLMAVMLVWHYTTIKKYEFDLHNKVTLEWLLALGDKLGMVRVPGIGLVYTDLTSGVPANFSRFVTNLPAFHQVLVFVCVKSVPVPYVFPAERYLI 581          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT4_ARATH (Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 1.530e-86
Identity = 145/227 (63.88%), Postives = 182/227 (80.18%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+IT TFSIIKQC ALGCFPR+K++HTS  I+GQIYIPEINW LM+L LA+ +GFRDT  +GNA G+A + VM +TT  M+LVIV+ W +S             +E +Y SA+L+K  EG WVP  L+FIF++AMYVWHYGT +KY FD+ NKVS+ W+L LGP+LGIVRV GIGL+++EL +G+PAIFSHFVTNLPAFH+VVVF+C+KSVPVPHV P+ERFL+
Sbjct:  356 GSQAVITTTFSIIKQCHALGCFPRIKVVHTSKHIYGQIYIPEINWILMILTLAMAIGFRDTTLIGNAYGIACMVVMFITTFFMALVIVVVWQKSCFLAALFLGTLWIIEGVYLSAALMKVTEGGWVPFVLTFIFMIAMYVWHYGTRRKYSFDLHNKVSLKWLLGLGPSLGIVRVPGIGLVYSELATGVPAIFSHFVTNLPAFHKVVVFVCVKSVPVPHVSPEERFLI 582          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK3_ORYSJ (Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.530e-86
Identity = 148/227 (65.20%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+I+ATFSI++QC+ALGCFPRVKI+HTS +IHGQIY PEINW LMLLC+A+T+G RDT  +GNA G+A   VMLVTT LM+LVIV  W  S           G VEA+Y SA+L+K  +G W+P+ LS +F+  MYVWHYGT +K++FDVQNKVS+ WI +LGP+LGIVRV GIG+I++EL +G+PAIFSHFVTNLPAFHQV+VF+C+K+VPVPHVR +ER LV
Sbjct:  370 GSQAVISATFSIVRQCTALGCFPRVKIVHTSRRIHGQIYSPEINWILMLLCIAVTMGLRDTTLIGNAYGMACAGVMLVTTLLMALVIVFVWQYSCLVAALFLVAFGVVEAVYLSAALMKVPQGGWLPLVLSLVFVAVMYVWHYGTRRKHQFDVQNKVSLRWIHALGPSLGIVRVPGIGIIYSELATGVPAIFSHFVTNLPAFHQVLVFICVKAVPVPHVRDEERHLV 596          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
POT6_ARATH5.404e-10881.50Potassium transporter 6 OS=Arabidopsis thaliana GN... [more]
HAK10_ORYSJ9.218e-10880.18Potassium transporter 10 OS=Oryza sativa subsp. ja... [more]
POT8_ARATH4.575e-10781.22Potassium transporter 8 OS=Arabidopsis thaliana GN... [more]
HAK25_ORYSJ4.282e-10578.41Potassium transporter 25 OS=Oryza sativa subsp. ja... [more]
HAK24_ORYSJ3.069e-10377.09Potassium transporter 24 OS=Oryza sativa subsp. ja... [more]
POT2_ARATH2.879e-9370.48Potassium transporter 2 OS=Arabidopsis thaliana GN... [more]
HAK9_ORYSJ1.094e-9269.16Probable potassium transporter 9 OS=Oryza sativa s... [more]
HAK8_ORYSJ1.866e-9270.04Putative potassium transporter 8 OS=Oryza sativa s... [more]
POT4_ARATH1.530e-8663.88Potassium transporter 4 OS=Arabidopsis thaliana GN... [more]
HAK3_ORYSJ1.530e-8665.20Probable potassium transporter 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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