FC920931

Overview
NameFC920931
Unique NameFC920931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANAB_DICDI (Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.342e-83
Identity = 138/216 (63.89%), Postives = 170/216 (78.70%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRE-NGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV+ VD+  DE+ IPYDV+WLDI HTDGK+YFTWD  +FP P +MQ  +  K R MVTIVDPHIKRD++Y++H+EAT KGYY+K+    DYDGWCWPGSSSYLD  NPEIR WW T+F Y+ Y GSTP+LYIWNDMNEPSVFNGPEV+M +DA H    EHR++HN YGYY+HMA++DGL++R  +  DRPFVL+RAF+AGSQ   + G + T  N
Sbjct:  406 DVKQVDNGFDENHIPYDVIWLDIEHTDGKRYFTWDNNNFPTPADMQNIIGAKHRKMVTIVDPHIKRDNNYYVHSEATSKGYYIKNKDGNDYDGWCWPGSSSYLDFTNPEIRKWWATQFGYDKYKGSTPNLYIWNDMNEPSVFNGPEVSMHKDAKHHGGFEHRDVHNLYGYYYHMASADGLVQRNADQNDRPFVLSRAFYAGSQ---RIGAIWTGDN 618          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANAB_MACFA (Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.171e-74
Identity = 128/215 (59.53%), Postives = 151/215 (70.23%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV  VD   DEH++P DV+WLDI H DGK+YFTWD   FP P  M  +LA+K R +V IVDPHIK D  Y +H+E    G YVK     DY+GWCWPGS+ Y D  NP +R WW   FSY+NY GS P+L++WNDMNEPSVFNGPEVTM +DA H    EHR++HN YG Y HMAT+DGL +R  G +RPFVLARAFFAGSQ   +FG V T  N
Sbjct:  408 DVLEVDQGFDEHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTMLERLASKRRKLVAIVDPHIKVDSGYRVHDELRNLGLYVKTRDGSDYEGWCWPGSAGYPDFTNPTMRAWWANMFSYDNYEGSAPNLFVWNDMNEPSVFNGPEVTMLKDAQHYGGWEHRDVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQ---RFGAVWTGDN 619          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANAB_MOUSE (Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.837e-74
Identity = 126/215 (58.60%), Postives = 152/215 (70.70%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV  VD   D+H++P DV+WLDI H DGK+YFTWD   FP P  M   LA+K R +V IVDPHIK D  Y +H E    G YVK     DY+GWCWPGS+SY D  NP +R WW   FS++NY GS P+LY+WNDMNEPSVFNGPEVTM +DA+H    EHR++HN YG Y HMAT+DGL++R  G +RPFVL+RAFF+GSQ   +FG V T  N
Sbjct:  408 DVLEVDQGFDDHNMPCDVIWLDIEHADGKRYFTWDPTRFPQPLNMLEHLASKRRKLVAIVDPHIKVDSGYRVHEELRNHGLYVKTRDGSDYEGWCWPGSASYPDFTNPRMRAWWSNMFSFDNYEGSAPNLYVWNDMNEPSVFNGPEVTMLKDAVHYGGWEHRDIHNIYGLYVHMATADGLIQRSGGIERPFVLSRAFFSGSQ---RFGAVWTGDN 619          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANAB_HUMAN (Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3)

HSP 1 Score: 276.944 bits (707), Expect = 6.317e-74
Identity = 127/215 (59.07%), Postives = 150/215 (69.77%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV  VD   D+H++P DV+WLDI H DGK+YFTWD   FP P  M  +LA+K R +V IVDPHIK D  Y +H E    G YVK     DY+GWCWPGS+ Y D  NP +R WW   FSY+NY GS P+L++WNDMNEPSVFNGPEVTM +DA H    EHR++HN YG Y HMAT+DGL +R  G +RPFVLARAFFAGSQ   +FG V T  N
Sbjct:  408 DVLEVDQGFDDHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTMLERLASKRRKLVAIVDPHIKVDSGYRVHEELRNLGLYVKTRDGSDYEGWCWPGSAGYPDFTNPTMRAWWANMFSYDNYEGSAPNLFVWNDMNEPSVFNGPEVTMLKDAQHYGGWEHRDVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQ---RFGAVWTGDN 619          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANAB_PIG (Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.032e-72
Identity = 125/215 (58.14%), Postives = 151/215 (70.23%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV  V+   D+H++P D +WLDI H DGK+YFTWD   FP P  M   LA+K R +V IVDPHIK D SY +H E    G YVK     DY+GWCWPG++SY D  NP++R WW   F +ENY GS+ +LY+WNDMNEPSVFNGPEVTM +DA H    EHR+LHN YG+Y HMAT+DGL+ R  G +RPFVL+RAFFAGSQ   +FG V T  N
Sbjct:  408 DVLEVNQGFDDHNLPCDFIWLDIEHADGKRYFTWDPSRFPQPRTMLEHLASKRRKLVAIVDPHIKVDSSYRVHEELQNLGLYVKTRDGSDYEGWCWPGAASYPDFTNPKMRAWWADMFRFENYEGSSSNLYVWNDMNEPSVFNGPEVTMLKDAQHYGGWEHRDLHNIYGFYVHMATADGLVLRSGGVERPFVLSRAFFAGSQ---RFGAVWTGDN 619          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANC_HUMAN (Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.484e-70
Identity = 119/215 (55.35%), Postives = 158/215 (73.49%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV+ VD+  DEHDIPYD +WLDI HT+GK+YFTWD+  FP+P+ MQ  L +K R +V I DPHIK D  Y ++ +A ++G++VK+    D++G CWPG SSYLD  NP++R W+ + F++  Y GST  L++WNDMNEPSVF GPE TM ++A+H    EHRELHN YG+Y  MAT++GL+KR  GK+RPFVL R+FFAGSQ   ++G V T  N
Sbjct:  377 DVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFPNPKRMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPEQTMQKNAIHHGNWEHRELHNIYGFYHQMATAEGLIKRSKGKERPFVLTRSFFAGSQ---KYGAVWTGDN 588          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANC_MACFA (Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.610e-69
Identity = 118/215 (54.88%), Postives = 157/215 (73.02%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV+ VD+  DEHDIPYD +WLDI HT+GK+YFTWD+  FP+PE MQ  L +K R +V I DPHIK D  Y ++ +A ++G++VK+    D++G CWPG SSYLD  NP++R W+ + F++  Y GST  L++WNDMNEPSVF  PE TM ++A+H    EHRELHN YG+Y  MAT++GL++R  GK+RPFVL R+FFAGSQ   ++G V T  N
Sbjct:  232 DVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKKRFPNPERMQELLRSKKRKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRRPEQTMQKNAIHHGNWEHRELHNIYGFYHQMATAEGLIQRSGGKERPFVLTRSFFAGSQ---KYGAVWTGDN 443          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GANC_MOUSE (Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.103e-69
Identity = 119/215 (55.35%), Postives = 158/215 (73.49%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGMEQFGQVITQQN 647
            DV+ VD+  DEHDIPYDV+WLDI HT+ KKYFTWD+  F +P+ MQ  L +K R +V I DPHIK D  Y ++ +A E+G++VK+    D++G CWPG SSYLD  NP++R W+ + F++  Y GST  L++WNDMNEPSVF GPE+TM + A+H    EHRELHN YG+Y  MAT++GL++R  GK+RPFVL+R+FFAGSQ   ++G V T  N
Sbjct:  361 DVKAVDAGFDEHDIPYDVMWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKKRKLVVISDPHIKVDPDYTVYAQAKEQGFFVKNPEGGDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVFRGPELTMHKSAVHYGDWEHRELHNIYGFYQQMATAEGLIQRSKGKERPFVLSRSFFAGSQ---KYGAVWTGDN 572          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GLU2A_SCHPO (Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe GN=gls2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.042e-56
Identity = 98/205 (47.80%), Postives = 140/205 (68.29%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRD-YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQGM 614
            DV  VD+K DE D+PYD +WLDI +   ++YFTWD+ +FP+P+ M  KL +K R ++ I+DPHIK D +Y++  E  +  Y VKD +  D Y+  CWPG+S ++D  NPE + WWG+ + ++ +  S  +L+IWNDMNEPSVF GPE +M RDA+H    EHR++HN YG+     T +GL+KR  G  RPF+L R+FFAG+  +
Sbjct:  390 DVLNVDAKFDEVDMPYDTIWLDIEYASKRRYFTWDKATFPNPKAMLEKLDSKSRKLIVILDPHIKNDPNYFVSKELIDYNYAVKDKSGVDNYNADCWPGNSVWVDFFNPEAQAWWGSLYEFDRF-ESDKNLWIWNDMNEPSVFRGPETSMHRDAIHYGGWEHRDIHNIYGHKCINGTYNGLIKRGEGAVRPFILTRSFFAGTSAL 593          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: GLU2A_YEAST (Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae GN=ROT2 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.016e-47
Identity = 91/204 (44.61%), Postives = 131/204 (64.22%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFS-YENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKD-RPFVLARAFFAGSQ 608
            DV  VDS++D H IPYD +WLD+ +T+ KKYFTW + SFP+P+ +  KL   GR++V ++DPH+K+D  Y + +    +   VKD    DY G CWPG+S ++D ++   +  W + F  + +      +L+IWNDMNEPS+F+GPE T P+D +H + +E R +HN YG   H AT D +    +  D RPF+L RAFFAGSQ
Sbjct:  404 DVLTVDSQMDAHMIPYDFIWLDLEYTNDKKYFTWKQHSFPNPKRLLSKLKKLGRNLVVLIDPHLKKD--YEISDRVINENVAVKDHNGNDYVGHCWPGNSIWIDTISKYGQKIWKSFFERFMDLPADLTNLFIWNDMNEPSIFDGPETTAPKDLIHDNYIEERSVHNIYGLSVHEATYDAIKSIYSPSDKRPFLLTRAFFAGSQ 605          
The following BLAST results are available for this feature:
BLAST of FC920931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
GANAB_DICDI3.342e-8363.89Neutral alpha-glucosidase AB OS=Dictyostelium disc... [more]
GANAB_MACFA2.171e-7459.53Neutral alpha-glucosidase AB OS=Macaca fasciculari... [more]
GANAB_MOUSE4.837e-7458.60Neutral alpha-glucosidase AB OS=Mus musculus GN=Ga... [more]
GANAB_HUMAN6.317e-7459.07Neutral alpha-glucosidase AB OS=Homo sapiens GN=GA... [more]
GANAB_PIG2.032e-7258.14Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANA... [more]
GANC_HUMAN2.484e-7055.35Neutral alpha-glucosidase C OS=Homo sapiens GN=GAN... [more]
GANC_MACFA1.610e-6954.88Neutral alpha-glucosidase C (Fragment) OS=Macaca f... [more]
GANC_MOUSE2.103e-6955.35Neutral alpha-glucosidase C OS=Mus musculus GN=Gan... [more]
GLU2A_SCHPO2.042e-5647.80Glucosidase 2 subunit alpha OS=Schizosaccharomyces... [more]
GLU2A_YEAST1.016e-4744.61Glucosidase 2 subunit alpha OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionC32014H12EF RVDevelop1 Citrus clementina cDNA clone C32014H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920931 ID=FC920931; Name=FC920931; organism=Citrus clementina; type=EST; length=666bp
AGGATGTGGAGTTAGTGGATTCCAAAATCGATGAGCATGATATTCCTTAT
GATGTTTTGTGGCTGGATATTGCACATACAGATGGCAAGAAGTATTTTAC
TTGGGATAGGTTGTCGTTTCCACACCCGGAAGAGATGCAGAGAAAGTTGG
CTACCAAGGGTAGGCATATGGTAACGATTGTGGATCCACATATTAAGAGG
GATGATTCATATTGGTTGCATAATGAGGCAACCGAGAAAGGGTATTATGT
TAAAGATGCGACAAAGAGGGATTATGATGGATGGTGCTGGCCTGGTTCGT
CCTCATATTTGGATATGCTGAATCCAGAGATTCGGACTTGGTGGGGTACT
AAGTTCTCCTATGAAAATTATGTTGGTTCGACACCTTCGTTGTACATTTG
GAATGACATGAATGAGCCTTCTGTCTTTAATGGTCCAGAGGTGACAATGC
CGAGAGATGCTTTACATCTTGACCGTGTTGAACATCGAGAATTACATAAT
GCTTACGGTTATTACTTCCATATGGCTACATCTGATGGGCTTCTAAAGCG
TGAAAATGGCAAGGACCGGCCTTTTGTATTGGCAAGAGCATTCTTTGCTG
GAAGTCAAGGTATGGAGCAGTTTGGACAGGTGATAACACAGCAGAATGGG
AAACACTCANGGTTTC
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