FC920941

Overview
NameFC920941
Unique NameFC920941
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length808
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7777 contig Ccv1_Contig7777:847..1654. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920941 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.721e-30
Identity = 75/197 (38.07%), Postives = 113/197 (57.36%), Query Frame = 2
Query:   53 TAISFLLLTFATKP-LAGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMSD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRATYKIVHCPSVCESCVSLCNDVG--VSNDHARRLALTN 613
            TA+  LL  F +K    G+A+    P++D +G++++    YY++S+I               + CP  VVQ  SD + GT + FS +D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D+G    +D   RLAL++
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSD 199          
BLAST of FC920941 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 6.272e-27
Identity = 71/192 (36.98%), Postives = 99/192 (51.56%), Query Frame = 2
Query:   71 LLTFATKPLAGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMSD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRATYKIVHCPSVCESCVSLCNDVGVSNDH--ARRLALTN 613
            LL  A  PL   AD    P++D++G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E        YK+V CP+VC SC   C DVG+  D    RRLAL++
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEF-CGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of FC920941 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.078e-18
Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 2
Query:  113 PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMSDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRATYKIVHCPSVCESCVSLCNDVGVSND--HARRLALTN 613
            P+VD++G  V    DY++VSAI              N+  CPL VVQ   D+          + K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++ G    +YK   CPS   + +  CN+V +  D    RRL LTN
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLP-FSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTN 172          
BLAST of FC920941 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14
Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 2
Query:  107 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMSDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRATYKIVHCPSVCESCVSLCNDVGVSNDHARRLAL 607
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP   +S    C+D+G++ +  R L L
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLG--SLAYKLVFCP---KSSSGSCSDIGINYEGRRSLVL 162          
BLAST of FC920941 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11
Identity = 56/184 (30.43%), Postives = 84/184 (45.65%), Query Frame = 2
Query:  107 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPL--DVVQLSSD-SERGTRLRF--SMSDKTSIINEDVDLNVRF--STETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRATYKIVHCPSVCESCVSLCNDVGVSNDHA-RRLALTNGRALAVV 634
            A P++DV G ++++   Y ++S                N   P    + + +SD    GT +RF  S S     I E+  LN++F  ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP    S    C+ VGV + +  RRLAL N   L V+
Sbjct:    5 ATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VKSSQLGYNLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALVNENPLDVL 182          
The following BLAST results are available for this feature:
BLAST of FC920941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASP_THECC2.721e-3038.0721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU6.272e-2736.98Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA9.078e-1835.29Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE2.093e-1427.98Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI2_SOLTU2.829e-1130.43Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionC32201B03EF RVDevelopN Citrus clementina cDNA clone C32201B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920941 ID=FC920941; Name=FC920941; organism=Citrus clementina; type=EST; length=808bp
AACTCACTCAATCAGCTCTCTGAAAGATAACAAAATGAGTACTCCTTTTG
TAACTGCAATCTCCTTCCTTCTCCTTACCTTTGCCACAAAACCTCTTGCG
GGACTCGCTGATCCTTTGGTTGATGTCAATGGCAACAAGGTCGAAGCATC
CCGAGACTACTATTTGGTCTCAGCAATTCGAGGAGCAGGCGGTGGCGGCC
TCACCCTCTTCAGGGGCAGAAACGAACTCTGCCCACTTGATGTTGTCCAA
CTAAGTTCCGACTCAGAAAGAGGAACCCGTTTAAGATTCTCAATGTCTGA
TAAAACTAGTATTATCAATGAAGATGTGGATCTGAACGTGAGATTCTCGA
CAGAGACTCGCTGCAACGAACCAACAGTATGGAGAGTCGACAGCTATGAT
CCATCGAGAGGAAAATGGTTTATAACAACTGGTGGTGTTGAAGGAAACCC
TGGAGCTCAAACTTTGAAAAACTGGTTTAAGTTTGAGAGAATTGGAAGAG
ATCGAGCTACGTACAAGATTGTTCACTGTCCTTCCGTTTGCGAATCCTGT
GTATCTTTATGCAATGATGTTGGGGTTTCTAACGATCATGCTCGACGTTT
GGCTCTCACTAATGGGCGCGCGCTTGCTGTTGTTCTAGTCCCTGGTAATG
AGAGATCAGCCTCATGTGCGTCTTGAATGCCCTCGTATCATTACTCTAAT
AAATGGATCGGCTAGCTCCTGACGCTTAAACATAACAAAATGTCATGCTA
GCTAGCTGTGTACTTTGAAGAATAAAGTGCGAATTTGACTGTCAAAAAAA
AAAAAAAA
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