FC920946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y992_SYNY3 (Uncharacterized tRNA/rRNA methyltransferase slr0992 OS=Synechocystis sp. (strain PCC 6803) GN=slr0992 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.454e-30 Identity = 73/152 (48.03%), Postives = 101/152 (66.45%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 +++VLV+PQIP NTG IARTCAA+ LHLVGPLGF++ D LKRAGLDYWPYV + H++ EF ++R Q G LL F+ GT + +Y+ D+L+ GSET GL P+ + D +++ + IPM + R LNL+ S IA++EA Sbjct: 2 VKLVLVNPQIPPNTGNIARTCAATGTELHLVGPLGFELGDRYLKRAGLDYWPYVDLHYHNSCEEFITHWRGQGG--NLLGFSVTGTVNFWDYTYQSTDWLMMGSETDGL-PQMMRDLSTQ-----LLCIPMPHSEVRSLNLASSAAIALFEA 145
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y766_HAEIN (Probable tRNA/rRNA methyltransferase HI0766 OS=Haemophilus influenzae GN=HI0766 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.534e-27 Identity = 68/152 (44.74%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 L +VL P+IP NTG I R CA + LHL+ PLGF DD +L+R+GLDY + +K H T+ + F + E KRL A T +G HS++ ++ GDYL+FG ET G+P L + E IRIPM R +NLS SV + VYEA Sbjct: 2 LDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTF----EAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQ----KIRIPMTAN-SRSMNLSNSVAVTVYEA 144
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: YIBK_ECOLI (Uncharacterized tRNA/rRNA methyltransferase yibK OS=Escherichia coli (strain K12) GN=yibK PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.372e-27 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 L +VL P+IP NTG I R CA + LH++ P+GF DD +L+RAGLDY + V H + F + E +RL A T +GT HS +SY+ GDYL+FG ET GLP L +E IRIPMV R +NLS +V + VYEA Sbjct: 2 LNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRA----FLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQ----KIRIPMVPD-SRSMNLSNAVSVVVYEA 144
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: YIBK_ECOL6 (Uncharacterized tRNA/rRNA methyltransferase yibK OS=Escherichia coli O6 GN=yibK PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.372e-27 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 L +VL P+IP NTG I R CA + LH++ P+GF DD +L+RAGLDY + V H + F + E +RL A T +GT HS +SY+ GDYL+FG ET GLP L +E IRIPMV R +NLS +V + VYEA Sbjct: 2 LNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRA----FLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQ----KIRIPMVPD-SRSMNLSNAVSVVVYEA 144
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: CSPR_BACSU (Uncharacterized tRNA/rRNA methyltransferase cspR OS=Bacillus subtilis GN=cspR PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.537e-24 Identity = 67/155 (43.23%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGD---YLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 L VVL P+IP NTG IARTCAA+ LHL+ PLGF DD LKRAGLDYW +V V H + E + ++ + + TK G H+ Y D + +FG ETSGLP + + + +R+PM E + R LNLS + I VYEA Sbjct: 6 LHVVLYQPEIPANTGNIARTCAATNTTLHLIRPLGFSTDDKMLKRAGLDYWEFVNVVYHDSLEELFEAYK----KGKFFFITKFGQQPHTSFDYTDLDEDYFFVFGRETSGLPKDLIQNNMDR-----CLRLPMTE-HVRSLNLSNTAAILVYEA 150
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: YGL3_BACST (Uncharacterized tRNA/rRNA methyltransferase in gldA 3'region OS=Bacillus stearothermophilus PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.301e-23 Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISY---RKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 L VVL P+IP NTG IARTCAA+ LHL+ PLGF DD L+RAGLDYW +V + + + D+F QQ TK G ++ + K + IFG ET+GLP E L + +RIPM E R LNLS + I VYEA Sbjct: 3 LHVVLFQPEIPANTGNIARTCAATNTALHLIRPLGFSTDDKMLRRAGLDYWEFVNIHYYDS----LDHFFQQNQNGDFYYITKFGKRYYTSYDFSDPSKEIFFIFGRETTGLPKELLAENEDR-----CLRIPMTEN-VRALNLSNTAAILVYEA 147
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y956_LISMF (Uncharacterized tRNA/rRNA methyltransferase LMOf2365_0956 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_0956 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.786e-23 Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 309 VVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISY---RKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 +VL P+IP NTG I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + + EF F + EG + TK G +S+I Y K + +FG ET+GL P+ALL E +RIPM + + R LNLS + I YEA Sbjct: 5 IVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNEGGE-FYYITKFGRHVYSDIDYSDPNKDYFFVFGKETTGL-PDALLQKNEE----NCLRIPMTD-HIRSLNLSNTAAILAYEA 147
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y934_LISIN (Uncharacterized tRNA/rRNA methyltransferase lin0934 OS=Listeria innocua GN=lin0934 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.879e-22 Identity = 65/153 (42.48%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 309 VVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISY---RKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYEA 758 +VL P+IP NTG I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + + EF F + G + TK G +S++ Y K + +FG ET+GLP E LL E +RIPM + + R LNLS + + YEA Sbjct: 5 IVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNAGGE-FYYITKFGRHVYSDVDYSDPNKNYFFVFGKETTGLPDE-LLQANEE----NCLRIPMTD-HIRSLNLSNTAAVLAYEA 147
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y521_MYCPN (Uncharacterized tRNA/rRNA methyltransferase MG346 homolog OS=Mycoplasma pneumoniae GN=MPN_521 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.667e-18 Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISY----RKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYE 755 + +VL P+IP NTG I R+C A LHL+ P GF ++D ++ RAGL+ W V + H +W F K + TK GT+T +I+ R+ Y +FG ET GLP + E + +RIP + R +NLS +V +YE Sbjct: 6 INIVLFCPEIPNNTGNIVRSCTAFKANLHLIKPYGFFLNDKRMVRAGLNCWDKVQMFEHKSWEHF---IETTPPNKAIWLLTKSGTTTPDQINMQTDNREQLYFVFGQETKGLPQTLM-----EQYSQNQVRIP-IWNPVRSINLSNTVACVLYE 151
BLAST of FC920946 vs. ExPASy Swiss-Prot
Match: Y346_MYCGE (Uncharacterized tRNA/rRNA methyltransferase MG346 OS=Mycoplasma genitalium GN=MG346 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.986e-16 Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 3 Query: 303 LQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEI----SYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYXRCLNLSVSVGIAVYE 755 + +VL P+IP NTG I R+C A LHL+ P GF ++D ++ RAGL+ W + + H +W F + K + TK G T +I Y +FG ET GLP + + F IRIP+ + R +NL+ +V +YE Sbjct: 6 INIVLFCPEIPNNTGNIVRSCTAFKANLHLIKPYGFFLNDKRMVRAGLNCWDKIQLFEHKSWEHF---LQATTENKTIWLLTKSGDKTPDQICMTNKLPNELYFVFGQETKGLPKTIM-----DNFKQNQIRIPIWNS-VRSINLANAVVCILYE 151 The following BLAST results are available for this feature:
BLAST of FC920946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920946 ID=FC920946; Name=FC920946; organism=Citrus clementina; type=EST; length=758bpback to top |