FC923093

Overview
NameFC923093
Unique NameFC923093
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14478 contig Ccv1_Contig14478:3..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.222e-74
Identity = 133/210 (63.33%), Postives = 163/210 (77.62%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPVKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWIEELN 705
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI  NYKGLQDKIK+V ++L DRPAWYKEKVYP NK+P+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDI   RP L  +IEE+N
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVN 218          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.222e-74
Identity = 133/210 (63.33%), Postives = 163/210 (77.62%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPVKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWIEELN 705
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI  NYKGLQDKIK+V ++L DRPAWYKEKVYP NK+P+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDI   RP L  +IEE+N
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVN 218          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.939e-67
Identity = 124/209 (59.33%), Postives = 156/209 (74.64%), Query Frame = 1
Query:   85 TTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPVKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWIEELN 705
            ++ +E LP  L S +E P LFDGT RLY+ Y CPFAQRAWI  N+KGLQDKI+LV ++LQD+PAWYKEKVY    +P+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT  +Y+    K D   +   A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+I   RP L  +IEE+N
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEIN 217          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.491e-63
Identity = 114/210 (54.29%), Postives = 152/210 (72.38%), Query Frame = 1
Query:   82 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPV--KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWIEELN 705
            +++ +E+LPP L S ++ PP+FDGT RLY+ Y CPFAQRAW+T N KGLQDK++LV ++LQD+PAWYK+KVY    +P+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+FADELF+  + FT  +Y+          +   A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI   RP L  +I+E+N
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMN 217          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  139 PLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPV----KQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWI 693
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   +P LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   ELFS + +       S   +      ++    F  LE+ L       F     S +D    P+ ER +     E         PKL  W+
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNE----CVDHTPKLKLWM 203          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 62/205 (30.24%), Postives = 95/205 (46.34%), Query Frame = 1
Query:  136 PPLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKFADEL--FSHIDTFTNDVYTSFKGDPVKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXC-------SRPKLAAWIEELNSS 711
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++  AD L   +H       V         KQ    F+ L++A +   +  +   Q    D    PF E+     S +   D+           PKL  W +++ SS
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQ-GKAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRLTAVAHAVPLLFAVMRDRTLKDEKQR-KVFEVLKQAENLLANDFYAGSQPGYPDYLSFPFFEKIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISS 218          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1
Query:  139 PLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTF-------TNDVYTSFKGDPVKQAGPAFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWI 693
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P   +P LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   EL S +           N+   S   + +++    F  LE+ L K     F     S +D    P+ ER +     E         PKL  W+
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRK---EFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLEALELNE----CIDHTPKLKLWM 203          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 1
Query:  139 PLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPVKQAGPAF-DYLEKALDKFDDG------PFFLG-QFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWI 693
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   +P LE+  G +I ES+   +Y+D  +    L PDDP ++   K   ELFS + +    + TSF     K+  P   + L+K   K ++        FF G   S +D    P+ +R +     E         PKL  W+
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLEALELNE----CIDHTPKLKLWM 203          
BLAST of FC923093 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  139 PLFDGTPRLYMSYSCPFAQRAWITGNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPVKQAGPAF-DYLEKALDKFDDG----PFFLG--QFSQVDIAYIPFVERFQIFLSEEFKYDIXCSRPKLAAWI 693
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P+  +P LE++ G ++ ES+   +Y+D  +    L PDDP K+   K   E FS +      +  SF     K+  P   + LE    K ++G      FLG    S VD    P+ +R +     E K +     PKL  W+
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPWFQRLEAL---ELK-ECLAHTPKLKLWM 202          
The following BLAST results are available for this feature:
BLAST of FC923093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ7.222e-7463.33Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI7.222e-7463.33Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ2.939e-6759.33Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE7.491e-6354.29Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_HUMAN6.019e-1227.98Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_CAEEL6.019e-1230.24Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
GSTO1_PIG7.861e-1229.08Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_RAT1.027e-1129.95Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_MOUSE1.341e-1130.10Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
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Properties
Property NameValue
Genbank descriptionC31701A05EF StrClemenN Citrus clementina cDNA clone C31701A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923093 ID=FC923093; Name=FC923093; organism=Citrus clementina; type=EST; length=715bp
GATTTCGGTATCAGGTAACTTTCTTCTTCAAAGCAAAAGAAAAGCTTTCA
GGAAACCTCTAGAGTCTTACCTTCCTCAATGGCAACCACAGCGCAAGAGA
ATCTTCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGAT
GGAACTCCCAGGTTGTACATGTCTTACTCGTGCCCATTTGCTCAGCGTGC
GTGGATCACCGGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTC
CACTGAACCTCCAAGATAGGCCCGCTTGGTACAAGGAGAAGGTTTATCCT
GTTAACAAGATTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATC
TCTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACTTT
TACCTGATGATCCTGAGAAACGAAAGTTTGCTGATGAACTGTTTTCCCAC
ATCGATACCTTCACCAACGATGTGTATACTTCATTCAAAGGAGACCCAGT
AAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAAT
TTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATAGCC
TATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATTTAA
GTATGACATCNACTGCAGCAGGCCTAAACTGGCAGCATGGATTGAGGAGT
TGAACAGCTCGATGC
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