FC923109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 5.923e-107 Identity = 190/206 (92.23%), Postives = 198/206 (96.12%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKLLDQT V+HLFPITKYLGLLATG TADAR+LV QARNEAAE+RFK+GYEMPVDVLS+WIADKSQVYTQHAYMRPLGVVAM+LGIDEEKGPQL+KCDPAGHFFGHKATSAG KEQEAINFLEKKMKNDP FSYEETVQTA+SALQSVL Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 375.941 bits (964), Expect = 1.045e-103 Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGSG GY+RHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDS+CVVT KKVPDKLLD T VTHLFPITKYLGLLATG TADAR+LV QARNEAAE+RF +GYEMPVDVL++WIADKSQVYTQHAYMRPLGVVAMVLGID+E GPQLYKCDPAGH+FGHKATSAGLK+QEAINFLEKKMKNDP+F+YEETVQTA+SALQSVL Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 6.777e-103 Identity = 179/206 (86.89%), Postives = 197/206 (95.63%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKA ITSIGVRGKDSVCVVTQKKVPDKLLDQ+ V+HLFP+TKYLGLLATG TAD+RSLV QARNEAAE+RF++GYEMP D+L++WIADKSQVYTQHAYMRPLGVVAMVLGIDEE+GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P F+Y+ETVQTA+SALQSVL Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 1.156e-102 Identity = 182/206 (88.35%), Postives = 196/206 (95.15%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRG+GAGYDRHITIFSPEGRL+QVEYAFKAVK+ +TSIGVRGKDSVCVVTQKKVPDKLLD T VTHLFPITKY+GLLATG TADARSLV+QARNEAAE+RFK+GYEMPVDVL++WIADK+QVYTQHAYMRPLGVVAMVLG DEEK QL+KCDPAGHFFGHKATSAGLKEQEAINFLEKKMK+DP FSYEETVQ A+SALQSVL Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 369.007 bits (946), Expect = 1.278e-101 Identity = 176/206 (85.44%), Postives = 196/206 (95.15%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVK ITSIGVRGKDSVCVVTQKKVPDKLLDQ+ VTHLFPITKY+GL+ATG TADARSLV QARN+AAE+RF +GYEMPVD+L++WIADKSQVYTQHAYMRPLGVVAMV+G+DEE GP LYKCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P+F+++ETVQTA+SALQSVL Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.070e-71 Identity = 128/206 (62.14%), Postives = 169/206 (82.04%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L +VL Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.070e-71 Identity = 128/206 (62.14%), Postives = 169/206 (82.04%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L +VL Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.070e-71 Identity = 128/206 (62.14%), Postives = 169/206 (82.04%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L +VL Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.070e-71 Identity = 128/206 (62.14%), Postives = 169/206 (82.04%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQTAVSALQSVL 678 MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ +TS+ VRGKD +VTQKKVPDKLLD + VTHLF IT+ +G + TG TAD+RS V +AR EAA +++K+GYE+PVD+L + IAD SQVYTQ+A MRPLG +++GIDEE+GPQ+YKCDPAG++ G KAT+AG+K+ E+ +FLEKK+K +++E+TV+TA++ L +VL Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVL 206
BLAST of FC923109 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.521e-59 Identity = 115/211 (54.50%), Postives = 154/211 (72.99%), Query Frame = 1 Query: 61 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKATAITSIGVRGKDSVCVVTQKKVPDKLLDQTCVTHLFPITKYLGLLATGNTADARSLVHQARNEAAEYRFKFGYEMPVDVLSRWIADKSQVYTQHAYMRPLGVVAMVLGIDEEKGPQLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPTFSYEETVQT-----AVSALQSVL 678 MSR AGYD I IFSP+G+L+Q+EYAFKA+K +TS+G+RGKD V V TQKK+PDKL+D VT L+ +T Y+G + TG D++S +A E A + KFGY++P +VL++ +AD +Q+ TQHA RPLGV +++GID+E GPQL+K DPAG F G+KAT+AG KEQE+ NFLEKK K++P S +ET+Q A+S LQSVL Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVL 210 The following BLAST results are available for this feature:
BLAST of FC923109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923109 ID=FC923109; Name=FC923109; organism=Citrus clementina; type=EST; length=678bpback to top |