FC929843

Overview
NameFC929843
Unique NameFC929843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_DANRE (Diphthamide biosynthesis protein 2 OS=Danio rerio GN=dph2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.797e-24
Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 1
Query:   43 DFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHIR 507
            D  L Y+   T  FI S  F +VALQ   FPD LL D++R+   +                D      +++ DT+YGSCCVDEV A H+ ADC++HYG +CLSP   LP  +VFGK  I+   C  +  +        I+VL+ + Y+HAI  +R
Sbjct:   28 DLLLLYQTPETCRFITSNHFKKVALQ---FPDELLPDAVRVSAEIE---------------DKTKAKTYILGDTSYGSCCVDEVAAEHVGADCIVHYGSSCLSPCRRLPLLYVFGKRPIDVHQCASSFKELYPNLQSHIIVLFDVTYSHAIDDLR 164          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_XENLA (Diphthamide biosynthesis protein 2 OS=Xenopus laevis GN=dph2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   28 NSLDMDFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAI 495
            +S + D    YEI  T +FI      +VALQ   FPD+LL DS+++ R L    G+                 +++ DT+YGSCCVDEV A H+ A+ ++HYG  CLSP   LP  +VFG+ ++N   C E    H       ++VL  + Y HA+
Sbjct:   27 SSPEKDLGEFYEIEKTVEFIQRNAAQKVALQ---FPDDLLLDSVKVARKLEEATGAKT---------------YILGDTSYGSCCVDEVAAEHVKANVLVHYGRACLSPCCRLPVSYVFGRKAVNMDLCAEAFLSHYRDTESHVVVLSDVVYDHAL 164          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_GIBZE (Diphthamide biosynthesis protein 2 OS=Gibberella zeae GN=DPH2 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21
Identity = 55/149 (36.91%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            YEI  TAD I +  + R+ LQ   FPD +L D+ R+V AL  E+ +    D E +  ++ I  +V+AD++Y +CCVDE+ A H+ AD V+HYG TCLSPTS LPA +V+    ++    I  + K        ++++  L Y + +  +
Sbjct:   41 YEIVRTADEIRAGGWKRIGLQ---FPDFMLVDAPRVVEALSKEINT---HDQEEAKPERRI--YVLADSSYSACCVDEIAAEHVSADVVVHYGRTCLSPTSHLPAIYVYTTHDLDYEVTINEIKKEFSDKTVKLVIMADLTYQNHVDKV 181          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_CHICK (Diphthamide biosynthesis protein 2 OS=Gallus gallus GN=DPH2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 53/151 (35.10%), Postives = 75/151 (49.67%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHIRE 510
            YE+   A F+    F +VALQ   FPD LL D+  +   +    G+                ++V+ DTTYGSCCVDEV A H+ A  V+HYG  CLSP   LP   VFG+  ++   C E   +        ++VL  + YAHA+  + +
Sbjct:   32 YEVDRAAAFVRDGGFRKVALQ---FPDALLADAAAVAARMEEVTGA---------------EMYVLGDTTYGSCCVDEVAAEHVSAGAVVHYGPACLSPCRKLPVLHVFGRQPLDVGRCAEVFRELYPERQSRVVVLSDVVYAHAMGELEK 164          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_SCHPO (Diphthamide biosynthesis protein 2 OS=Schizosaccharomyces pombe GN=dph2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASIN 402
            YEI  T DFI S  +  VALQ   FPD  L DS         ++ S+ ++  E +V        ++ADT YGSCCVDEV A H+ AD ++HYG  CLSPTS LP  +VFG+  IN
Sbjct:   37 YEINRTVDFIKSGNYNSVALQ---FPDEHLADS--------GKVASILTNLVEANVQ-------ILADTNYGSCCVDEVAAEHMSADAIVHYGRACLSPTSRLPVLYVFGRLPIN 133          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_ASPFU (Diphthamide biosynthesis protein 2 OS=Aspergillus fumigatus GN=dph2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 57/181 (31.49%), Postives = 87/181 (48.07%), Query Frame = 1
Query:   37 DMDFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELG----------------------SLRSSDGERSVDDK---DIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            D +  + Y+I  T   I   ++ R+ALQ   FPD++L D+ R+ + L   L                        L     + SVDDK   +  L+++ADT+YG+CCVDEV A H++AD V+HYG +CLSPT+ LP  +VF    +     I+            I++   + Y   IP +
Sbjct:   36 DEELSITYDIERTLQEIRQARYKRIALQ---FPDDMLPDAPRVFQLLSRGLACRDVDKITVEKNGNGTGGVESEKLAQDVSQLSVDDKPEPEPKLYILADTSYGTCCVDEVAAEHVNADVVVHYGRSCLSPTARLPVIYVFTHKELPIEPVIQAFKATYPDQATKIILAADVTYCDHIPAV 213          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_EMENI (Diphthamide biosynthesis protein 2 OS=Emericella nidulans GN=dph2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   13 TERLVNSLDMDFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAEL--------GSLRSSDGE--------------RSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            T R+++  + +  + Y+I  T   I   ++ R+ALQ   FPD +L D+ R+ + L   L        GS  +++ E              +  D+    L+++ADT+YG+CCVDEV A H+DAD V+HYG +CLSPT+ LP  +VF    +     ++   +        +++   + Y+  IP +
Sbjct:   29 TNRILS--EEELAITYDIERTLKEIRQARYKRIALQ---FPDEMLPDAPRVFQLLSRGLEARDIVDGGSKANTETEPTDGLVDSASRLDLKDADEWSPKLYILADTSYGTCCVDEVAAEHVDADVVVHYGRSCLSPTARLPVIYVFTHKELPLDPVLKAFKETYPDPETKVILAADVTYSDHIPEV 209          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_NEMVE (Diphthamide biosynthesis protein 2 OS=Nematostella vectensis GN=dph2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 60/181 (33.15%), Postives = 81/181 (44.75%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYG------------------------------SCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHIRE 510
            YEI  +   I S  F +VALQ   FPD+LL DS  + R +  +  S ++              F++ADT+YG                              SCCVDE+ A H DA+ +IHYG  CLS T  LP  +VFGK  IN   C ++  +     G  +LV Y + Y H I  + E
Sbjct:   44 YEIERSVQVITSSGFNKVALQ---FPDSLLADSASVARLIE-QRASCKA--------------FILADTSYGRHPPLPANKTFLKLYNVRICFKLLAFLHFSSCCVDEIAAEHADAELIIHYGQACLSQTKRLPVLYVFGKNPINVIECSQHFRQLYPDTGIRVLVFYDVVYNHCIGALDE 206          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_NEUCR (Diphthamide biosynthesis protein 2 OS=Neurospora crassa GN=dph-2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 57/193 (29.53%), Postives = 91/193 (47.15%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSL-----------------------RSSDGE--RSVDDKDIG-------------------LFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            YEI  TA  +    + R+ LQ   FPD++L D+ R+V+ L AEL SL                        +++G+  R+V     G                   ++V+ADT+Y +CCVDE+ A H++AD V+HYG +CLSPTS LP  +VF K  ++    +    K        ++++  + Y   +P +
Sbjct:   42 YEITRTAKEVGEGGWRRIGLQ---FPDHMLCDAPRVVQLLEAELASLPQPTVPTSTADLQSTATACPEPSTTNNGQCGRNVQQNGTGCGCGKQAPAPVESQPKARRVYVLADTSYSACCVDEIAAEHVNADVVVHYGRSCLSPTSRLPVIYVFTKHILDRDAALVKFEKEYPDKEAKVVLMADVTYQVHVPSL 231          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_CANAL (Diphthamide biosynthesis protein 2 OS=Candida albicans GN=DPH2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 1
Query:   97 KFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            K+ R+ LQ   FPDNL+ DS  IV  L+ EL  +  ++ +    +    ++++ADT+Y +CCVDEV A H+ +D V+H+G  CL+    L A FV GK +++    ++ + K A +  + ++++    + + +P I
Sbjct:   72 KYKRITLQ---FPDNLICDSATIVHELQRELNIVPQANQDTGESNTAQRVWILADTSYSACCVDEVAAEHVRSDLVVHFGDACLNEIDKLQAVFVLGKPTLDVDAIVKQI-KTAYSTEQKVVLMSDAPHTYLLPEI 203          
The following BLAST results are available for this feature:
BLAST of FC929843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DPH2_DANRE1.797e-2438.06Diphthamide biosynthesis protein 2 OS=Danio rerio ... [more]
DPH2_XENLA7.549e-2336.54Diphthamide biosynthesis protein 2 OS=Xenopus laev... [more]
DPH2_GIBZE4.142e-2136.91Diphthamide biosynthesis protein 2 OS=Gibberella z... [more]
DPH2_CHICK1.333e-1935.10Diphthamide biosynthesis protein 2 OS=Gallus gallu... [more]
DPH2_SCHPO2.273e-1946.09Diphthamide biosynthesis protein 2 OS=Schizosaccha... [more]
DPH2_ASPFU2.273e-1931.49Diphthamide biosynthesis protein 2 OS=Aspergillus ... [more]
DPH2_EMENI1.473e-1829.57Diphthamide biosynthesis protein 2 OS=Emericella n... [more]
DPH2_NEMVE4.287e-1833.15Diphthamide biosynthesis protein 2 OS=Nematostella... [more]
DPH2_NEUCR2.127e-1729.53Diphthamide biosynthesis protein 2 OS=Neurospora c... [more]
DPH2_CANAL2.127e-1732.35Diphthamide biosynthesis protein 2 OS=Candida albi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34001A05EF PostHarvC1 Citrus clementina cDNA clone C34001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929843 ID=FC929843; Name=FC929843; organism=Citrus clementina; type=EST; length=709bp
GAAGAGTGAAATACAGAGAGATTAGTAAACTCTTTGGACATGGACTTCGA
ATTAAATTACGAAATTGCCAGCACTGCCGATTTTATTTACAGTAGGAAAT
TCACTAGAGTTGCTTTGCAGTGATTTTAGTTTCCAGATAATTTATTGAAG
GATTCAATAAGAATAGTGCGAGCGCTGAGGGCCGAACTTGGGTCACTTAG
AAGTTCTGATGGTGAACGGAGTGTGGATGACAAAGATATTGGATTATTTG
TAATGGCAGACACAACTTATGGCAGCTGTTGTGTTGACGAGGTTGGAGCA
TCCCACATTGATGCCGATTGTGTCATACATTATGGACATACCTGTCTTAG
CCCGACATCGACTCTTCCCGCATTCTTTGTATTCGGAAAGGCTTCCATTA
ATACATCAAACTGCATTGAAAACTTATCAAAGCATGCTTTGACCAATGGC
AAACCTATTTTGGTTCTTTATGGATTGGAGTATGCGCATGCAATACCACA
TATTAGAGAAGCAGTGAAAGTAGCATCAAGCTCTTATGGGTCTGGGTCGA
AATTAGAAAGCAATTTTGCTGATGTTATGTGTTCAGTTATAACACCATCC
AAAGATCATAAAAGTTTATGTGGACCAGCTGGTGGCTGCACTGCTGATGA
GAGTTCTTACGCAGTAGCTGGTACTAGGCATACAATTGGAGGCTTGGTCT
GGAATATCC
back to top