FC930767

Overview
NameFC930767
Unique NameFC930767
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11318 contig Ccv1_Contig11318:467..1171. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 390.963 bits (1003), Expect = 3.363e-108
Identity = 189/219 (86.30%), Postives = 203/219 (92.69%), Query Frame = 3
Query:    3 IRTVAPAIERLERAFATMAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            IR V+P ++RL+R F++MA+EHPFK I T LPKPGGGEFGKFYSLPALNDPR++KLPYSIRILLESAIRNCDNFQV KED+EKIIDWE ++PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDV RSENAV+ANME EFQRNKERFAFLKWGS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT     P
Sbjct:   76 IRAVSPVLDRLQRTFSSMASEHPFKGIFTTLPKPGGGEFGKFYSLPALNDPRVDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTKGLLYP 294          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.119e-103
Identity = 183/202 (90.59%), Postives = 194/202 (96.04%), Query Frame = 3
Query:   54 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            MAAE+PFKE LT+LPKPGGGEFGK+YSLP+LNDPRI++LPYSIRILLESAIRNCDNFQVKKED+EKIIDWENS+PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDV RSENAV+ANME EFQRNKERFAFLKWGS+AF NMLVVPPGSGIVHQVNLEYLGRVVFNT+    P
Sbjct:    1 MAAENPFKENLTSLPKPGGGEFGKYYSLPSLNDPRIDRLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTSGLLYP 202          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 357.066 bits (915), Expect = 3.327e-102
Identity = 173/202 (85.64%), Postives = 185/202 (91.58%), Query Frame = 3
Query:   54 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            MA+E+PF+ IL AL KP GGEFG +YSLPALNDPRI+KLPYSIRILLESAIRNCD FQVK +D+EKI+DWEN++PKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMN LG DSNKINPLVPVDLVIDHSVQVDV RSENAV+ANME EFQRNKERFAFLKWGS+AFHNMLVVPPGSGIVHQVNLEYL RVVFNT     P
Sbjct:    1 MASENPFRSILKALEKPDGGEFGNYYSLPALNDPRIDKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLARVVFNTNGLLYP 202          

HSP 2 Score: 36.5798 bits (83), Expect = 3.327e-102
Identity = 15/19 (78.95%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F  +G+LYPDSVVGTDSHT
Sbjct:  194 FNTNGLLYPDSVVGTDSHT 212          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 7.028e-98
Identity = 173/202 (85.64%), Postives = 184/202 (91.09%), Query Frame = 3
Query:   54 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            MAAEHPFK ILT LPKPGGGE+GKFYSLPALNDPRI+KLPYSIRILLESAIRNCDNFQV + D+EKIIDWEN++PK  EIPFKPARVLLQDFTGVPAVVDLA MRDAM KLGSD+NKINPLVPVDLVIDHSVQVDV RS NAV++NME EF+RN ERF FLKWGS+AFHNMLVVPPGSGIVHQVNLEYLGRVVFNT     P
Sbjct:    1 MAAEHPFKNILTTLPKPGGGEYGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVNQNDVEKIIDWENTSPKLAEIPFKPARVLLQDFTGVPAVVDLAAMRDAMAKLGSDANKINPLVPVDLVIDHSVQVDVARSPNAVQSNMELEFKRNNERFGFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTDGIMYP 202          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 3.610e-94
Identity = 161/218 (73.85%), Postives = 191/218 (87.61%), Query Frame = 3
Query:    6 RTVAPAIERLERAFATMAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            R   P +E+ ER +ATMA+EH +K+ILT+LPKPGGGE+GK+YSLPALNDPRI+KLP+S+RILLESAIRNCDN+QV K+D+EKI+DWEN++ KQVEI FKPARV+LQDFTGVP +VDLA MRDA+  LGSD +KINPLVPVDLV+DHS+QVD  RSE+A + N+E EF+RNKERF FLKWGS+AF NMLVVPPGSGIVHQVNLEYLGRVVFN+     P
Sbjct:   82 RNSTPVMEKFERKYATMASEHSYKDILTSLPKPGGGEYGKYYSLPALNDPRIDKLPFSVRILLESAIRNCDNYQVTKDDVEKILDWENTSTKQVEIAFKPARVILQDFTGVPVLVDLASMRDAVKNLGSDPSKINPLVPVDLVVDHSIQVDFARSEDAAQKNLELEFKRNKERFTFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNSKGFLYP 299          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_DICDI (Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.527e-68
Identity = 129/197 (65.48%), Postives = 154/197 (78.17%), Query Frame = 3
Query:   54 MAAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTT 644
            M   +PF ++   L      +   FY+L  L DPRIEKLPYSIRILLESA+RNCDNF+V ++D+E I++WEN+A K VEIPFKPARVLLQDFTGVPAVVDLA MRDAM +LG D  KINPLVPVDLVIDHSVQVDV+R+ +A++ N + EF RN ERF+FLKWG+ AF  + + PPGSGIVHQVNLEY+ R V N T
Sbjct:    1 MTTNNPFDKVKDVLKSQD--QTYNFYNLSKLQDPRIEKLPYSIRILLESAVRNCDNFEVHEKDVENILNWENTANK-VEIPFKPARVLLQDFTGVPAVVDLAAMRDAMKRLGGDPAKINPLVPVDLVIDHSVQVDVSRTVDALEQNQKIEFHRNHERFSFLKWGAQAFDGLFIAPPGSGIVHQVNLEYIAREVMNGT 194          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_BOVIN (Cytoplasmic aconitate hydratase OS=Bos taurus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.836e-68
Identity = 118/198 (59.60%), Postives = 147/198 (74.24%), Query Frame = 3
Query:   66 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +PF  ++  L     G+  KF++L  L D R   LP+SIR+LLE+AIRNCD F VKK D+E I++W+    K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG +  KINP+ P DLVIDHS+QVD  R  +++K N + EF+RNKERF FLKWGS AFHNM ++PPGSGI+HQVNLEYL RVVF+    Y P
Sbjct:    3 NPFAHLVEPLDPAQPGK--KFFNLNKLEDSRYGSLPFSIRVLLEAAIRNCDQFLVKKNDVENILNWKVMQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGNPEKINPICPADLVIDHSIQVDFNRRADSLKKNQDLEFERNKERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYP 198          

HSP 2 Score: 31.9574 bits (71), Expect = 2.836e-68
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G  YPDS+VGTDSHT
Sbjct:  190 FDQDGYYYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_HUMAN (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 4.823e-68
Identity = 118/198 (59.60%), Postives = 147/198 (74.24%), Query Frame = 3
Query:   66 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +PF  +   L     G+  KF++L  L D R  +LP+SIR+LLE+AIRNCD F VKK+DIE I+ W  +  K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG D  KINP+ P DLVIDHS+QVD  R  ++++ N + EF+RN+ERF FLKWGS AFHNM ++PPGSGI+HQVNLEYL RVVF+    Y P
Sbjct:    3 NPFAHLAEPLDPVQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAIRNCDEFLVKKQDIENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYP 198          

HSP 2 Score: 31.9574 bits (71), Expect = 4.823e-68
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G  YPDS+VGTDSHT
Sbjct:  190 FDQDGYYYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.372e-67
Identity = 116/199 (58.29%), Postives = 147/199 (73.87%), Query Frame = 3
Query:   63 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            ++PF  +   L     G+  +F++L  L D R  +LP+SIR+LLE+A+RNCD F VKK DIE I++W     K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG +  KINP+ P DLVIDHS+QVD  R  ++++ N + EF+RNKERF FLKWGS AF NM ++PPGSGI+HQVNLEYL RVVF+   CY P
Sbjct:    2 KNPFAHLAEPLDAAQPGK--RFFNLNKLEDSRYGRLPFSIRVLLEAAVRNCDEFLVKKNDIENILNWNVMQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGNPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEFERNKERFEFLKWGSQAFCNMRIIPPGSGIIHQVNLEYLARVVFDQDGCYYP 198          

HSP 2 Score: 31.9574 bits (71), Expect = 2.372e-67
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G  YPDS+VGTDSHT
Sbjct:  190 FDQDGCYYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.858e-67
Identity = 117/198 (59.09%), Postives = 146/198 (73.74%), Query Frame = 3
Query:   66 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +PF +I+   P        KF++L  L D R  +LP+SIR+LLE+AIRNCD F VKK+D+E I++W+    K VE+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG D  KINP+ P DLVIDHS+QVD  R  ++++ N + EF+RNKERF FLKWGS AF NM ++PPGSGI+HQVNLEYL RVV +    Y P
Sbjct:    3 NPFVQIVE--PLDAKEPVKKFFNLSKLEDVRYARLPFSIRVLLEAAIRNCDEFLVKKQDVENILNWKVMQHKNVEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPICPADLVIDHSIQVDFNRRSDSLQKNQDLEFERNKERFEFLKWGSQAFKNMRIIPPGSGIIHQVNLEYLARVVMDQDGYYYP 198          

HSP 2 Score: 31.5722 bits (70), Expect = 6.858e-67
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  644 GMLYPDSVVGTDSHT 688
            G  YPDSVVGTDSHT
Sbjct:  194 GYYYPDSVVGTDSHT 208          
The following BLAST results are available for this feature:
BLAST of FC930767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ACO2M_ARATH3.363e-10886.30Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACOC_CUCMA1.119e-10390.59Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACO1_ARATH3.327e-10285.64Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACOC_ORYSJ7.028e-9885.64Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACO3M_ARATH3.610e-9473.85Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_DICDI1.527e-6865.48Probable cytoplasmic aconitate hydratase OS=Dictyo... [more]
ACOC_BOVIN2.836e-6859.60Cytoplasmic aconitate hydratase OS=Bos taurus GN=A... [more]
ACOC_HUMAN4.823e-6859.60Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]
ACOC_MOUSE2.372e-6758.29Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]
ACOC_CHICK6.858e-6759.09Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]

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Properties
Property NameValue
Genbank descriptionC34108G11EF PostHarvP1 Citrus clementina cDNA clone C34108G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930767 ID=FC930767; Name=FC930767; organism=Citrus clementina; type=EST; length=704bp
AGATCAGAACCGTTGCTCCTGCCATCGAACGGCTCGAACGCGCCTTTGCT
ACTATGGCTGCTGAACATCCATTCAAGGAGATCTTGACCGCTCTTCCAAA
GCCAGGAGGTGGCGAGTTTGGAAAGTTCTATAGCCTTCCTGCACTCAATG
ATCCAAGAATTGAGAAGCTGCCATACTCTATCAGAATCCTGCTTGAATCT
GCTATTCGTAATTGTGACAACTTTCAAGTTAAGAAGGAAGATATCGAGAA
AATTATTGACTGGGAAAATTCTGCACCAAAGCAAGTTGAAATTCCCTTCA
AGCCTGCTCGTGTATTGTTGCAGGATTTTACTGGAGTACCAGCCGTGGTT
GACCTTGCCTGCATGCGTGATGCTATGAACAAGCTTGGCAGTGATTCCAA
CAAGATCAATCCTCTTGTTCCTGTAGATCTTGTCATTGATCATTCGGTTC
AGGTTGATGTAACAAGATCGGAAAATGCAGTTAAGGCAAATATGGAATTT
GAATTTCAGAGGAACAAGGAGAGATTCGCTTTCCTCAAATGGGGATCTAG
TGCTTTCCATAACATGCTTGTTGTTCCTCCTGGTTCTGGTATTGTGCATC
AGGTCAATCTTGAATATCTGGGACGGGTTGTTTTCAATACCACGGCATGC
TATACCCCGACAGTGTGGTTGGTACTGATTCTCATACACCATGATTGATG
GGTT
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