FC930776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930776 vs. ExPASy Swiss-Prot
Match: U566_XENLA (UPF0566 protein OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 98 KDQLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 580 + +LLA L +L I EHP V TVE +V ++GG SKNLFLKDKK + ++VS L D +V++ L+++L LG G LR A E +MLE LKV G TP AL + DV +LD F +R +FHP++N ++ + + FLK G DP + + Sbjct: 6 RQELLAYLHELDIRPVCAEHPEVFTVEEMMPHVQHLGGAHSKNLFLKDKKKKGLWLVSVLHDRQVNLNDLAKKLNLGSGNLRFADEASMLEKLKVGQGCATPLALFCDRG-DVQFVLDAQFLEGGYERVYFHPMTNAATLGMTPQEFVTFLKKTGHDPIIIHFD 168
BLAST of FC930776 vs. ExPASy Swiss-Prot
Match: U566_BOVIN (UPF0566 protein OS=Bos taurus PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = 2 Query: 116 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLEAN 586 RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F ++ +FHP++N ++ L+ D F+K+ G DP ++ + N Sbjct: 13 RLAALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQINLNDLAKQLGVGSGNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFVKNTGHDPIILNFDKN 171
BLAST of FC930776 vs. ExPASy Swiss-Prot
Match: U566_HUMAN (UPF0566 protein OS=Homo sapiens PE=3 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 116 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 580 RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F ++ +FHP++N ++ L+ D F+K G DP ++ + Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFVKMTGHDPIILNFD 169
BLAST of FC930776 vs. ExPASy Swiss-Prot
Match: U566_MOUSE (UPF0566 protein OS=Mus musculus PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = 2 Query: 104 QLLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 580 +L RL L I EHP V T+E ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L ++LG+G G LR A E MLE LKV G TP +L + DV +LD F ++ +FHP++N ++ L+ D F+K+ G DP ++ + Sbjct: 9 ELEQRLGALAIRTEVVEHPEVFTIEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNDLGKQLGVGSGNLRFADETAMLEKLKVGQGCATPLSLFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLIFVKATGHDPIILNFD 169
BLAST of FC930776 vs. ExPASy Swiss-Prot
Match: U566_DANRE (UPF0566 protein OS=Danio rerio GN=zgc:64201 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 119 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKAQDRCFFHPLSNDMSISLNTNDLDKFLKSIGRDPAYVDLE 580 LK L IE + EHP V TVE +V ++ G ++KNLFLKDKK R ++V D + + LS+R LG LR+A E +LE L+V G VTP AL ++ R V +LD+ G C HP++N ++ + DL +FL+ P + + Sbjct: 31 LKRLNIETTCIEHPEVFTVEEMMPHVSHLSGVVTKNLFLKDKKRRVFLVCVRHDRPLALGELSRR--LGAPNLRLAEERLLLEKLRVRQGCVTPLALFLDTERSVTAVLDRELTHGGHTHIHC--HPMTNSATMGITPADLLRFLEETQHTPVILSFD 184 The following BLAST results are available for this feature:
BLAST of FC930776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930776 ID=FC930776; Name=FC930776; organism=Citrus clementina; type=EST; length=725bpback to top |