FC931765

Overview
NameFC931765
Unique NameFC931765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9416 contig Ccv1_Contig9416:505..1221. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 100/234 (42.74%), Postives = 119/234 (50.85%), Query Frame = 1
Query:    4 IETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDKPQ----PKVETVXXXXXXXXXXXXXXXXXXXQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVXXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEI 693
            IETDKVTID+ +P +G I EL AKEGE V  G  +  I+K     A                        + P+    PK E                            E RV MTR+R+R A RLKDSQNT AMLTTFNE+DM+ LM +R  YKD F +KHGVK G MS FVKA+   L+ QPI+NA                 AV   +GLVVPVIRN E ++FADIEKEI
Sbjct:  110 IETDKVTIDINAPVSGTIVELFAKEGENVTVGNDLYKIAKGEVAAAPKVEAPKAAEAPKAAAPTPAPKAAETPKAAPAPKSEAPTPAPKSTTTTTSTGPS----------ETRVKMTRIRQRTAQRLKDSQNTAAMLTTFNELDMSALMNMRKTYKDEFEKKHGVKFGFMSAFVKASTIALKEQPIVNASVEENDIVYHNNVNINVAVSAPRGLVVPVIRNCENLSFADIEKEI 333          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_TAKRU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37
Identity = 100/240 (41.67%), Postives = 126/240 (52.50%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDKPQPKVETVXXXXXXXXXXXXXXXXXXXQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP AGVI+EL+  +G  VE GT +  + K     A                            P V  V                    L  +  E RV M+R+R R+A RLK++QNT AMLTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVKAA   L +QP +NAV                  AV T KGLVVPVIRN E MNFADIE+ I  L +KA
Sbjct:   74 EIETDKTSVQVPSPAAGVIEELLVPDGGKVEGGTPLFKLRKGA--AAEAAPSSVTEPVTAAPPPPPPPVSAPTAMPSVPPVPTQALQAKPVPAPTLPEPSTLGGRG-ESRVKMSRMRLRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRTLHKDAFLKKHSIKLGFMSAFVKAAAHALTDQPAVNAVIDGATNEIVYRDYVDISVAVATPKGLVVPVIRNVETMNFADIERTINALGEKA 310          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_BOVIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.342e-35
Identity = 98/263 (37.26%), Postives = 130/263 (49.43%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDKPQPKVETVXXXXXXXXXXXXXXXXXXXQ--------------LPPKER---------ERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP  GVI+ L+  +G  VE GT +  + K+G   A                         K +P V  V                   Q               PP+           E R  M R+R+R+A RLK++QNT AMLTTFNE+DM+N+ ++R+ +KDAFL+KH +KLG MS FVKA+   LQ QP++NAV                  AV T +GLVVPVIRN E MN+ADIE+ I  L +KA
Sbjct:  106 EIETDKTSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAAAPAAAAP------------KAEPTVSAVPPPPAAPIPTQMPPVPSPSQPLTSKPVSAVKPTAAPPRAEAGAGVGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKA 356          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_RAT (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35
Identity = 95/250 (38.00%), Postives = 125/250 (50.00%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXD-KPQPKVETVXXXXXXXXXXXXXXXXXXXQLPPKER---------ERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP  G+I+ L+  +G  VE GT +  + K+G   A                           P P                          PP            E R  M R+R+R+A RLK++QNT AMLTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVKA+   LQ QP++NAV                  AV T +GLVVPVIRN E MN+ADIE+ I  L +KA
Sbjct:  106 EIETDKTSVQVPSPANGIIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAEAPATAYKAAPEAPAAPPPPVAPVPTQMPPVPSPSQPPSSKPVSAIKPTAAPPLAEAGAAKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKA 355          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_MOUSE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.990e-35
Identity = 94/254 (37.01%), Postives = 126/254 (49.61%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDKPQPKVETVXXXXXXXXXXXXXXXXXXXQLPPK--------------ERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP  G+I+ L+  +G  VE GT +  + K+G   A                          P P    +                    + P                 E R  M R+R+R+A RLK++QNT AMLTTFNEVDM+N+ ++R+ +KDAFL+KH +KLG MS FVKA+   LQ QP++NAV                  AV T +GLVVPVIRN E MN+ADIE+ I  L +KA
Sbjct:  106 EIETDKTSVQVPSPANGIIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAETPAPAHKAEPAAPAAP----PPPAAPVLTQMPPVPSPSQPPSSKPVSAIKPTAAPPLAEAGAAKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDMSNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKA 355          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_PIG (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Sus scrofa GN=DLST PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34
Identity = 92/251 (36.65%), Postives = 123/251 (49.00%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDK-----------PQPKVETVXXXXXXXXXXXXXXXXXXXQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP  GVI+ L+  +G  VE GT +  + K+G   A                                     P P                         +     E R  M R+R+R+A RLK++QNT AMLTTFNE+DM+N+  +R+ +K+AFL+KH +KLG MS FVKA+   LQ QP++NAV                  AV T +GLVVPVIRN E MN+ADIE+ I  L +KA
Sbjct:  106 EIETDKTSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKTGAAPAKAKPAEAPAAAAPKAEPAVSAVPPPPAASIPTQMPPVPSPPQPLTSKPVSAVKPTAAPPVAEPGAVKGLRAEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQDMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKA 356          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_HUMAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.938e-34
Identity = 95/252 (37.70%), Postives = 127/252 (50.40%), Query Frame = 1
Query:    1 QIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVAHVXXXXXXXXXXXXXXXXXXXXXXDKPQPKVETVXXXXXXXXXXXXXXXXXXXQ---LPPKER---------ERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV--XXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +IETDK ++ V SP  GVI+ L+  +G  VE GT +  + K+  G A                          P   + T                    +    PP            E R  M R+R+R+A RLK++QNT AMLTTFNE+DM+N+ ++R+ +K+AFL+KH +KLG MS FVKA+   LQ QP++NAV                  AV T +GLVVPVIRN E MNFADIE+ I  L +KA
Sbjct:  105 EIETDKTSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKT--GAAPAKAKPAEAPAAAAPKAEPTAAAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPPLAEAGAGKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDMSNIQEMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKA 354          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_RICBR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=sucB PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31
Identity = 73/134 (54.48%), Postives = 91/134 (67.91%), Query Frame = 1
Query:  313 KERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVXXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +ER  RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR +YKD F +KHGVKLG MS FV+A +  L+  P +NA                 AVGT +GLVVPV+R+A+ M FADIEK I  L KKA
Sbjct:  168 EERVERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRGKYKDEFEKKHGVKLGFMSFFVRATIEALKLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGLVVPVVRDADKMGFADIEKTIGGLAKKA 301          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_RICTY (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi GN=sucB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 1
Query:  313 KERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVXXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +ER +RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR++YK+ F +KH VKLG MS FVKA +  L+  P INA                 AVGT +GLVVPVIR+A+ M+FADIE+ I  L KKA
Sbjct:  166 EERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDLLYKNYYDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKA 299          
BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ODO2_RICFE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia felis GN=sucB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30
Identity = 71/134 (52.99%), Postives = 93/134 (69.40%), Query Frame = 1
Query:  313 KERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVXXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +ER +RV M+RLRK +A RLKDSQNT A+LTTFNE+DM+ ++ LR++YK+ F +KH VKLG MS FVKA +  L+  P +NA                 AVGT +GLVVPV+R+A+ M FA++EK I TL KKA
Sbjct:  169 EERVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQYKEEFEKKHLVKLGFMSFFVKATIEALKLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGLVVPVVRDADKMGFAEVEKAIGTLAKKA 302          
The following BLAST results are available for this feature:
BLAST of FC931765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ODO2_DICDI2.446e-3742.74Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_TAKRU3.195e-3741.67Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BOVIN1.342e-3537.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RAT2.990e-3538.00Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MOUSE2.990e-3537.01Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_PIG1.484e-3436.65Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_HUMAN1.938e-3437.70Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICBR3.421e-3154.48Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICTY9.955e-3154.48Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICFE1.698e-3052.99Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionC34201A01EF PostHarveN Citrus clementina cDNA clone C34201A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931765 ID=FC931765; Name=FC931765; organism=Citrus clementina; type=EST; length=717bp
CAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGTCCAGAAGCAGG
TGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGTGGAACCAGGTA
CCAAGATTGCTGTGATTTCAAAGTCTGGTGAAGGTGTAGCTCATGTAGCT
CCCTCAGAAAAAATACCAGAGAAAGCTGCTCCTAAGCCACCTTCTGCTGA
AAAAGCAAAGGAGGACAAGCCGCAGCCTAAAGTTGAAACTGTTTCTGAGA
AGCCTAAAGCACCCTCTCCACCACCTCCTAAGCGCACTGCTACTGAGCCT
CAGCTTCCCCCAAAGGAAAGGGAAAGACGAGTTCCTATGACAAGACTACG
TAAACGAGTTGCAACACGATTGAAAGACTCCCAAAATACATTTGCAATGT
TGACTACATTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTTCT
GAGTACAAGGATGCTTTTCTTGAAAAGCATGGAGTCAAATTGGGACTTAT
GTCAGGTTTTGTGAAAGCTGCTGTTAGTGGGCTCCAGAATCAGCCTATTA
TAAATGCAGTTATTGATGGGGGTGATATCATATATAGAGATTATATTGAC
ATTAGTATCGCTGTCGGTACTTCAAAGGGCCTGGTGGTTCCAGTAATCCG
CAATGCCGAATAGATGAATTTTGCTGATATCGAAAAAGAGATTTACACCT
TGCGAAAGAAAGCGATG
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