FC931783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 7.724e-89 Identity = 161/202 (79.70%), Postives = 175/202 (86.63%), Query Frame = 3 Query: 66 MSSFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 MSSFESVVVIDGKGHLLGRLAS VAKQLLNGQKIVVVRCEALNISGEFFRAKLKYH+YLRKMTR+NPTRGGPFHFRAPSRI YKA+RGM+PHKTARGAAALERLKV EG+PPP DKKK++VVPQALRVLRL+PGRK+CTVGRLS EVGWKY+DVVSRLEERRK K AYYE ++ A V+ KT L +FGY Sbjct: 1 MSSFESVVVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKAKGAAYYERKKVAARQLSEAKKSAKVNDKTAEALKEFGY 202
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.197e-73 Identity = 141/202 (69.80%), Postives = 160/202 (79.21%), Query Frame = 3 Query: 66 MSSFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 MS F+ VVVID KGHLLGRLAS VAKQLL GQK+VVVRCE LNISG FFR KLKY AYLRK R+NP+RG FHFRAPSRI KA+RGM+PHKTARG AALE L+ +EGIPPP DK+KRVVVP ALRVLRL+PGRKYCTVGRLS EVGWKY D+VS+LEERRKVKS A+Y+ + ++V+ K LA+FGY Sbjct: 1 MSEFQKVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGA-FHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYSDIVSKLEERRKVKSAAFYQAKLAKQKKIASAKAASSVNGK----LAEFGY 197
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16B_SCHPO (60S ribosomal protein L16-B OS=Schizosaccharomyces pombe GN=rpl16b PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.667e-73 Identity = 140/202 (69.31%), Postives = 160/202 (79.21%), Query Frame = 3 Query: 66 MSSFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 MS F+ VVVID KGHLLGRLAS VAKQLL GQK+VVVRCE LNISG FFR KLKY AYLRK R+NP+RG FHFRAPSRI KA+RGM+PHKTARG AALE L+ +EGIPPP DK+KRVVVP ALRVLRL+PGRKYCTVGRLS EVGWKY D+V++LEERRKVKS A+Y+ ++ + V+ K L+QFGY Sbjct: 1 MSEFQKVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGA-FHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYNDIVAKLEERRKVKSAAFYQAKLAKQKKIASAKEASPVNQK----LSQFGY 197
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16B_YEAST (60S ribosomal protein L16-B OS=Saccharomyces cerevisiae GN=RPL16B PE=1 SV=3) HSP 1 Score: 270.011 bits (689), Expect = 8.580e-72 Identity = 140/198 (70.71%), Postives = 157/198 (79.29%), Query Frame = 3 Query: 78 ESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 + VVVID K HLLGRLAST+AKQ+LNGQKIVVVR EALNISGEFFR KLKYH +LRK T FN TRG PFHFRAPSRILYKAIRGM+ HKTARG AALERLK+ EGIPPP DKKKRVVVPQALRVLRL+PGRKY T+G+LS VGWKY+DVV++LE++RKV+S YY A+ +S QLA FGY Sbjct: 3 QPVVVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNKTRG-PFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEDKRKVRSAEYYAKKRAFTKKVSSASAAAS-ESDVAKQLASFGY 198
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16A_YEAST (60S ribosomal protein L16-A OS=Saccharomyces cerevisiae GN=RPL16A PE=1 SV=3) HSP 1 Score: 266.159 bits (679), Expect = 1.239e-70 Identity = 141/200 (70.50%), Postives = 153/200 (76.50%), Query Frame = 3 Query: 72 SFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 S E VVVIDGKGHL+GRLAS VAKQLLNGQKIVVVR E LNISGEFFR KLKYH +LRK T FN TRG PFHFRAPSRI YKA+RGM+ HKTARG AALERLKV EGIPPP DKKKRVVVPQALRVLRL+PGRKY T+G+LS VGWKY+DVV++LE +RKV S YY A +S QLA GY Sbjct: 2 SVEPVVVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNKTRG-PFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEAKRKVSSAEYYAKKRAFTKKVASANATA-AESDVAKQLAALGY 199
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL16C_SCHPO (60S ribosomal protein L16-C OS=Schizosaccharomyces pombe GN=rpl16c PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.789e-69 Identity = 132/202 (65.35%), Postives = 158/202 (78.22%), Query Frame = 3 Query: 66 MSSFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYYEXXXXXXXXXXXXEQGANVDSKTKTQLAQFGY 671 MS F+ +V+ID KGHL+GRLASTVAKQLL GQK+VVVRCE LNISG FFR KLKY AYLRK R+NP+RG FHFRAPSRI KA+RGM+PHKT RG AL+ L+ LEGIPPP DK+KR+VVP ALRVLRL+P RKYCT+GRLS EVGWKY+++VS+LEERRK+KS A+Y+ + ++V+ K LA FGY Sbjct: 1 MSEFQKLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGA-FHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAALRVLRLKPSRKYCTIGRLSSEVGWKYKNIVSKLEERRKIKSAAFYQAKSANQKHINVAKTKSSVNEK----LAVFGY 197
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13A_CYAPA (60S ribosomal protein L13a OS=Cyanophora paradoxa PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.502e-63 Identity = 113/167 (67.66%), Postives = 142/167 (85.03%), Query Frame = 3 Query: 75 FESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYY 575 FE VVV+D +GHLLGRLA+T+AK+LLNGQ++V VR E +NISG FR KLK+HA+L+K NP RG PFHFR+P+RIL++ IRGM+PHKT RGAAALERLK EG+PPP DK KR+V+PQALRVLRL+PGRK+C +GRL+ EVGW++ D+V+RLEE+RK KS A+Y Sbjct: 2 FEKVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRG-PFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFY 167
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13A_MOUSE (60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=4) HSP 1 Score: 232.646 bits (592), Expect = 1.518e-60 Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 3 Query: 84 VVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYY 575 V+V+DG+GHLLGRLA+ VAKQ+L G+K+VVVRCE +NISG F+R KLKY A+LRK NP+RG P+HFRAPSRI ++ +RGM+PHKT RG AALERLKVL+GIPPP DKKKR+VVP AL+V+RL+P RK+ +GRL+HEVGWKYQ V + LEE+RK K+K +Y Sbjct: 6 VLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRG-PYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKMHY 168
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13A_BOVIN (60S ribosomal protein L13a OS=Bos taurus GN=RPL13A PE=2 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60 Identity = 110/164 (67.07%), Postives = 138/164 (84.15%), Query Frame = 3 Query: 84 VVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYY 575 V+V+DG+GHLLGRLA+ VAKQ+L G+K+VVVRCE +NISG F+R KLKY A+LRK NP+RG P+HFRAPSRI ++ +RGM+PHKT RG AALERLKV +GIPPP DKKKR+VVP AL+V+RL+P RK+ +GRL+HEVGWKYQ V + LEE+RK K+K +Y Sbjct: 6 VLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRG-PYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHY 168
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13A_RAT (60S ribosomal protein L13a OS=Rattus norvegicus GN=Rpl13a PE=1 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 7.534e-60 Identity = 110/164 (67.07%), Postives = 138/164 (84.15%), Query Frame = 3 Query: 84 VVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQDVVSRLEERRKVKSKAYY 575 V+V+DG+ HLLGRLA+ VAKQ+L G+K+VVVRCE +NISG F+R KLKY A+LRK NP+RG P+HFRAPSRI ++ +RGM+PHKT RG AALERLKVL+GIPPP DKKKR+VVP AL+V+RL+P RK+ +GRL+HEVGWKYQ V + LEE+RK K+K +Y Sbjct: 6 VLVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRG-PYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHY 168 The following BLAST results are available for this feature:
BLAST of FC931783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931783 ID=FC931783; Name=FC931783; organism=Citrus clementina; type=EST; length=701bpback to top |