GH733291

Overview
NameGH733291
Unique NameGH733291
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length169
Libraries
Library NameType
Citrus clementina pistils cDNA-AFLP librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15547 contig Ccv1_Contig15547:1..169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAVTQ 161
            PGG SVACST KA+EWDA W+NNLDPSGRAALGVH+SAYE Q+   N VT+
Sbjct:  517 PGGPSVACSTEKAIEWDASWSNNLDPSGRAALGVHVSAYEHQI---NPVTK 564          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.941e-15
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYE-KQVA 140
            PGGA+VACSTAKAVEWDA W+NN+DPSGRAA+GVHLSAY+ K VA
Sbjct:  516 PGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYDGKNVA 560          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.841e-15
Identity = 34/40 (85.00%), Postives = 39/40 (97.50%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYE 128
            PGGA+VACSTAKAVEWDA W+NN+DPSGRAA+GVHLSAY+
Sbjct:  517 PGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYD 556          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.552e-15
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYE 128
            PGG +VACSTAKAVEWDA W+NNLDPSGRAALGVHLSAY+
Sbjct:  516 PGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHLSAYD 555          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.557e-15
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAAS 146
            PGGAS+ACST KA+EWDA W+NNLDPSGRAALGVH SAY+ Q+  S
Sbjct:  516 PGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHDSAYDDQLNKS 561          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.460e-14
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAAS 146
            PGG S+ACSTAKA+EWDA W+NNLDPSGRAALGVH SAY+  + +S
Sbjct:  516 PGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVHDSAYDPPLPSS 561          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.906e-14
Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNAV 155
            PGG +VACSTAKAVEWDA W+NNLDPSGRAALGVH SAYE     +  V
Sbjct:  516 PGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHDSAYENHNKVNKTV 564          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 5.547e-14
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASNA 152
            PGG SVACSTAKAVEWDA W+ NLDPSGRAALGVH +AYE  +  S A
Sbjct:  516 PGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPA 563          
BLAST of GH733291 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.330e-12
Identity = 33/47 (70.21%), Postives = 34/47 (72.34%), Query Frame = 3
Query:    9 PGGASVACSTAKAVEWDAEWANNLDPSGRAALGVHLSAYEKQVAASN 149
            PGG SVACSTA AV WDA W+ NLDPSGRAA GVH  AYE  V   N
Sbjct:  516 PGGPSVACSTATAVAWDASWSKNLDPSGRAATGVHDLAYENHVPIGN 562          
The following BLAST results are available for this feature:
BLAST of GH733291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ASNS1_PEA1.320e-1574.51Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS_ARATH2.941e-1582.22Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_BRAOL3.841e-1585.00Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS1_LOTJA6.552e-1587.50Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS2_LOTJA8.557e-1576.09Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_ASPOF1.460e-1473.91Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS2_PEA1.906e-1473.47Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS_ORYSJ5.547e-1475.00Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
ASNS_TRIVS2.330e-1270.21Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
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Properties
Property NameValue
Genbank descriptionU_85 Citrus clementina pistils cDNA-AFLP library Citrus clementina cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GH733291 ID=GH733291; Name=GH733291; organism=Citrus clementina; type=EST; length=169bp
AGCAATGTCCNGGTGGTGCGAGTGTAGCATGCAGCACGGCTAAAGCTGTC
GAATGGGATGCTGAGTGGGCAAATAATCTTGATCCTTCTGGGAGGGCTGC
ACTGGGAGTNCATCTATCAGCTTATGAAAAGCAGGTAGCTGCTTCAAATG
CCGTTACTCAGGACTCATC
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