GH733298

Overview
NameGH733298
Unique NameGH733298
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length198
Libraries
Library NameType
Citrus clementina pistils cDNA-AFLP librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of GH733298 vs. ExPASy Swiss-Prot
Match: SYGM1_ARATH (Glycyl-tRNA synthetase 1, mitochondrial OS=Arabidopsis thaliana GN=GLYRS-1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.393e-11
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 3 
Query:   21 LQQIEHFVDPQAQISPKILSKLRNLEFLMFPREEQMSGKSAKRIPLGEAVSK 176
            L +IEHFVDP+ +  PK  S +  LEFLMFPREEQMSG+SAK++ LGEAV+K
Sbjct:  345 LAEIEHFVDPENKSHPKF-SDVAKLEFLMFPREEQMSGQSAKKLCLGEAVAK 395
The following BLAST results are available for this feature:
BLAST of GH733298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SYGM1_ARATH3.393e-1165.38Glycyl-tRNA synthetase 1, mitochondrial OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionU_94 Citrus clementina pistils cDNA-AFLP library Citrus clementina cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GH733298 ID=GH733298; Name=GH733298; organism=Citrus clementina; type=EST; length=198bp
GACTGCGTACCAATTCACACTTGCAGCAAATTGAGCACTTTGTTGATCCT
CAAGCACAAATCTCACCCAAAATTCTCAGCAAGTTGCGAAACTTGGAGTT
CCTGATGTTCCCAAGGGAGGAACAGATGTCAGGTAAATCTGCAAAGAGGA
TTCCACTAGGTGAAGCTGTTTCAAAGGTTGGTTTACTCAGGACTCATC
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