BG733597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD2_ORYSJ (Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica GN=Os05g0311000 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.933e-40 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 RIRIEGLLAAF KLVGTGKQHTYVETENVRYVYQPIE LYLLL+TNKQSNILEDL+TLRLLSKLVPEYS SLDE+G+CKTAFEL+FAF Sbjct: 26 RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD1_ORYSJ (Coatomer subunit delta-1 OS=Oryza sativa subsp. japonica GN=Os05g0310800 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.933e-40 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 RIRIEGLLAAF KLVGTGKQHTYVETENVRYVYQPIE LYLLL+TNKQSNILEDL+TLRLLSKLVPEYS SLDE+G+CKTAFEL+FAF Sbjct: 26 RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD3_ORYSJ (Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 8.568e-39 Identity = 77/88 (87.50%), Postives = 85/88 (96.59%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 RIRI+GLLAAF KLVG+GKQHTYVETENVRYVYQPIEALYLLL+TNKQSNILEDL+TLRLLSKL+PEY+ SLDE+G+CK AFELLFAF Sbjct: 26 RIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQPIEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELLFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_ARATH (Coatomer subunit delta OS=Arabidopsis thaliana GN=At5g05010 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.975e-35 Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 RIRIEGLLAAF KLVG GKQHTY+ETENVRYVYQPIEAL+LLLVT KQSNILEDL TL LLSKLVPEYS SLDE+GI + +FEL+FAF Sbjct: 26 RIRIEGLLAAFPKLVGMGKQHTYIETENVRYVYQPIEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_DICDI (Coatomer subunit delta OS=Dictyostelium discoideum GN=copd PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.495e-30 Identity = 61/86 (70.93%), Postives = 75/86 (87.21%), Query Frame = 1 Query: 7 RIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R+EGLLAAF KL+G G+QHT++ETEN+RYVYQP+E+LY++L+TNK SNILEDLETL LL+KLVPEYS + DE I K AFEL+F F Sbjct: 28 RVEGLLAAFPKLIGLGRQHTFIETENIRYVYQPLESLYIVLITNKNSNILEDLETLHLLAKLVPEYS-NFDEYDISKNAFELIFTF 112
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_RAT (Coatomer subunit delta OS=Rattus norvegicus GN=Arcn1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_PONAB (Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_MOUSE (Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_HUMAN (Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113
BLAST of BG733597 vs. ExPASy Swiss-Prot
Match: COPD_CHICK (Coatomer subunit delta OS=Gallus gallus GN=ARCN1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.371e-28 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 1 RIRIEGLLAAFTKLVGTGKQHTYVETENVRYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEDGICKTAFELLFAF 264 R RIEGLLAAF KL+ TGKQHT+VETE+VRYVYQP+E LY++L+T K SNILEDLETLRL S+++PEY +L+E+ I + F+L+FAF Sbjct: 26 RTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAF 113 The following BLAST results are available for this feature:
BLAST of BG733597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >BG733597 ID=BG733597; Name=BG733597; organism=Citrus sinensis; type=EST; length=264bpback to top |