BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.697e-24
Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERFLG + D +G+++EL PFGAGRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FGLT+ K  PLHAVPV
Sbjct:  422 FKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.877e-23
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERFLG + D +G+++EL PFGAGRRICPG+PLA++ + LML SL+ SFDWKL     + ++DM++ FGLT+ K  PLHAVPV
Sbjct:  421 FEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.075e-22
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPVAI 254
            F P+RFL S  D +G +F+LIPFGAGRRICPG+PLA RM+ +MLGSL+N+FDWK+D       +DM +K G T+ KA+PL  VP+ +
Sbjct:  403 FKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIPL 489          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.885e-22
Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERF+G + D KG+++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FG+T+ +   L+A+PV
Sbjct:  421 FEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPV 505          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.996e-21
Identity = 48/85 (56.47%), Postives = 64/85 (75.29%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERFL    D KG++FELIPFG+GRR+CPG+ +A++ +H++L SL+ SFDWKL N     N+DM + FGLT+ KA+ L AVPV
Sbjct:  422 FEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.487e-20
Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH----NMDMEDKFGLTVQKAEPLHAVP 245
            F PERFL S  D KGQN+ELIPFGAGRR+C GLPL  RM+H   GSL++ FDW+L ++    +++ME+  G+T +K +PL  +P
Sbjct:  381 FKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.639e-20
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  400 TFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 484          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.639e-20
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 3
Query:    3 TFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  399 TFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.392e-18
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAEPLHAVPV 248
            FIPERF+ +  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +PV
Sbjct:  407 FIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIPV 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.818e-18
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVPV 248
            FIPERF+ S  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +PV
Sbjct:  407 FIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIPV 491          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C76C2_ARATH1.697e-2461.18Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.877e-2358.82Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.075e-2256.327-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C4_ARATH7.885e-2254.12Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH2.996e-2156.47Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME1.487e-2053.57Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C80B2_ESCCA9.639e-2052.94(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA9.639e-2052.94(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BD_ARATH1.392e-1848.24Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH1.818e-1849.41Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
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