BQ622981

Overview
NameBQ622981
Unique NameBQ622981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:46..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.422e-50
Identity = 111/164 (67.68%), Postives = 113/164 (68.90%), Query Frame = 3
Query:  111 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.422e-50
Identity = 111/164 (67.68%), Postives = 113/164 (68.90%), Query Frame = 3
Query:  111 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.858e-50
Identity = 114/166 (68.67%), Postives = 114/166 (68.67%), Query Frame = 3
Query:  105 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.138e-50
Identity = 111/166 (66.87%), Postives = 114/166 (68.67%), Query Frame = 3
Query:  105 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            M+S+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    1 MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.405e-50
Identity = 113/166 (68.07%), Postives = 114/166 (68.67%), Query Frame = 3
Query:  105 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.059e-50
Identity = 110/164 (67.07%), Postives = 112/164 (68.29%), Query Frame = 3
Query:  111 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.059e-50
Identity = 110/164 (67.07%), Postives = 112/164 (68.29%), Query Frame = 3
Query:  111 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.219e-50
Identity = 110/161 (68.32%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  120 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.204e-49
Identity = 112/166 (67.47%), Postives = 114/166 (68.67%), Query Frame = 3
Query:  105 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            M+ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    1 MAST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.054e-49
Identity = 109/164 (66.46%), Postives = 112/164 (68.29%), Query Frame = 3
Query:  111 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
The following BLAST results are available for this feature:
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_MESCR1.422e-5067.68V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.422e-5067.68V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA1.858e-5068.67V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH4.138e-5066.87V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_GOSHI5.405e-5068.07V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ7.059e-5067.07V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI7.059e-5067.07V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU9.219e-5068.32V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.204e-4967.47V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_AVESA2.054e-4966.46V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00072 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00072 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622981 ID=BQ622981; Name=BQ622981; organism=Citrus sinensis; type=EST; length=608bp
TTTTTAGAAGTCATTAGTCTCCTCTTGAGAGAAAGAGCACCGGAACAAAT
AACGAAAACAAAACACACCGCCTCAAGTCTCAGATCCAGTCCGCATCTCC
CAAGATGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCATTCTTCG
GCTTTCTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTGCG
TACGGAACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATGAG
GCCGGAGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGTTT
TGGGTATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTAAC
CCTAAGGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCTTC
TGGCCTCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGA
TCGTCGGTGATGCTGGTGTCAGAGCTAATGCTCAACAGCCGAAGCTTTTC
GTTGGGATGATCCTCATTCTGATCTTTGCCGAAGCGCTGGCACTTTATGG
ACTTATTGGTGGGATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAG
ACTATAAG
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