BQ622984

Overview
NameBQ622984
Unique NameBQ622984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ622984 vs. ExPASy Swiss-Prot
Match: OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 1 
Query:   79 IDARKDLRDYWRIVVKNQDMPGESTQGLIPEDQASTVSKTTAYCHTHEDSEHTMEKPFFNKNFELMPDVSIY-DNGVKLTKQKAFVKDLELMPDVSIYDNGIKPKDKQRSFAKNFELMPDVSIY-DNGIKPTKQKAFAKHFEFLPDVSIY-DNGIKPTKQKFFAKDFELMPDVSIYD 600
            +++RKD+ +YW++V+K+QDMP E  QGL+    AS +  +           H  E       FE  P  S Y DN +   +    + + E  P+ S Y +     ++ +  +  FE  P++S Y DN I   + K     FE  P+ S Y DN I       F  DFE  P ++ Y+
Sbjct:   21 VESRKDVGEYWKLVMKDQDMP-EEIQGLL---DASNIKNS---------KTHAKENMGAIGEFEPRPYASAYGDNEIHAKENMGAIGEFEPRPNASAYGDNEIHANENKGASGEFEPRPNISAYGDNEIHANENKGAIGEFETRPNASAYGDNEIGAE----FTDDFEPRPSMTKYN 180
The following BLAST results are available for this feature:
BLAST of BQ622984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
OSS2_PEA4.457e-1129.94Organ-specific protein S2 OS=Pisum sativum PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00075 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00075 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622984 ID=BQ622984; Name=BQ622984; organism=Citrus sinensis; type=EST; length=665bp
CTGGCCAGAAACATGAATATCAAAGCCTTATTTGTTCTCTCCACAGTGCT
CTCATTGCTTCTCTTGTTTGCCAACATGATAGATGCGAGAAAAGACCTGA
GAGATTATTGGAGAATTGTCGTGAAAAATCAAGACATGCCTGGGGAATCA
ACTCAAGGTCTCATTCCTGAAGATCAAGCCTCGACCGTCTCTAAAACCAC
AGCCTATTGCCATACACATGAAGATTCTGAGCACACCATGGAGAAGCCTT
TTTTCAATAAGAACTTTGAGCTGATGCCTGATGTTTCAATCTATGACAAC
GGCGTTAAGCTGACGAAACAAAAGGCTTTTGTCAAGGACCTCGAGCTAAT
GCCTGATGTTTCAATTTATGACAACGGTATTAAACCAAAGGATAAGCAGA
GATCCTTCGCCAAGAACTTCGAGCTCATGCCTGATGTTTCAATTTACGAC
AACGGTATTAAGCCAACCAAACAAAAGGCTTTTGCCAAGCACTTCGAGTT
CTTGCCTGATGTTTCAATTTACGACAACGGTATTAAGCCAACCAAACAAA
AGTTCTTCGCCAAGGACTTCGAGCTCATGCCTGATGTTTCTATTTATGAC
AATGGTGTAAAGCTAGCCAAACAAAGGTTCTCCGCCAAGGACTTCGAACT
CATGCCTGATGTTTC
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